Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734735.1_202014-07-28] 9,152 sequences; 36,003,007 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq6174 354 9e-93 seq5079 158 1e-33 seq1345 154 2e-32 seq3791 125 8e-24 seq8285 82.4 9e-11 >seq6174 Length=4953 Score = 354 bits (392), Expect = 9e-93 Identities = 1159/1783 (65%), Gaps = 47/1783 (3%) Strand=Plus/Plus Query 80005 ACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGATAGTACATGCCCGTCTTG 80064 || || | |||||| |||| ||| |||| |||||||||| ||||||||||| |||||| Sbjct 1236 ACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATGCCGGTCTTG 1295 Query 80065 AGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCC 80124 || || |||||||||| | ||||| || ||| ||| | | || |||| | Sbjct 1296 AGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGC 1355 Query 80125 ATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATTTCA 80184 ||| |||||| || ||||| ||||| ||||| || ||||| || || ||||| | | Sbjct 1356 ATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGA 1415 Query 80185 ATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACACCTTACGAAGCTCCTCTGGA 80244 | | | ||| | || ||||| || || || | ||| ||||| || Sbjct 1416 ACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 1475 Query 80245 ATGT---CCAGATTTTGCACACTGCCACCGTCCTTTACAATTTGATTTTTCAATTCAGAC 80301 ||| | | || || | ||| || || | || | || |||| || Sbjct 1476 ATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCATGTCGTCT 1535 Query 80302 GTCCAGACACCAAGCTTGTGCAGATCTTTCA-CAAG--GTGCTTGTTAATCATGACAAAC 80358 | ||| | |||||||| | |||||| || | ||| | | ||| | | || || Sbjct 1536 GACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTACCTGGA---AC 1592 Query 80359 TCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTG 80418 || || || || || || | || | ||| | ||| || |||||||| ||||||| Sbjct 1593 TCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTCGTTG 1652 Query 80419 TTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGC 80478 || || ||||| || | |||||| || || ||||| ||| | || | || || || Sbjct 1653 TTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTTGCGG 1712 Query 80479 AGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTGA---CCAAAAATCAACCCCAACG 80532 | || || | |||||| | ||| | | || | ||| | || || | Sbjct 1713 ACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAGAGGTCTG----AAGG 1768 Query 80533 CTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACG 80590 || |||| ||||||||||| ||| | || |||| || | ||||| ||| || | | Sbjct 1769 CT-TGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTATG 1827 Query 80591 TCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAA 80650 || ||| || |||| | || || |||| || || | | || || ||||| || | Sbjct 1828 TCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTAGA 1887 Query 80651 TGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCA 80710 || |||||||| |||||| | | | || |||| || ||||| | || | | Sbjct 1888 TGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAAGGCAGACGGA 1947 Query 80711 TCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGT 80770 | ||| |||||||||| || || ||||| | |||| || | ||||||| ||| Sbjct 1948 GTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTGTGGCGCATGT 2007 Query 80771 TCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTG 80829 | | | || |||||| | | ||||| |||| ||||||| ||| |||||| Sbjct 2008 T-GCTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGATCTTGTTGAGGTTG 2066 Query 80830 CGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT----- 80884 || ||| || | || || ||||| ||||||| ||||||| ||| ||| | Sbjct 2067 CGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTCA--CCCTTGTGGT 2124 Query 80885 --TC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941 || || || || || |||||| || || ||||| || || ||||| |||| Sbjct 2125 AGTCGACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATACAGCAACCTCGTCAGGGG 2184 Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001 | | |||||| || |||||||| | || || ||| ||||| ||||| |||| Sbjct 2185 CAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCT 2244 Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061 |||| |||| |||||| |||||||| |||| ||||| |||| ||||| || Sbjct 2245 GGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCTCAGTCT 2304 Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTT 81121 | | || ||||||| | ||||| | | ||||||| | |||||| || || Sbjct 2305 GAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCTTGATCGTCTTGCGACCCTTACCGG 2364 Query 81122 CGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCT 81180 | | ||||||| | || | ||||||| |||||| | ||| | | |||| | Sbjct 2365 CCTGCTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCC-GCGAGGCCA 2423 Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240 ||||||||||| |||||||||| | ||||||| || ||||| || ||||||||| Sbjct 2424 GGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAAC 2483 Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGG 81300 ||||||||||| || ||| ||||||||| ||| || |||||| | || ||| Sbjct 2484 AGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGG 2543 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 || | | ||||| || || | || || || ||||| ||||| || || | ||| Sbjct 2544 TTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCA 2603 Query 81361 ATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417 | | || ||| ||||||||||| |||||| || || || ||| || ||| Sbjct 2604 AAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACA 2663 Query 81418 CGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTG 81477 |||| ||| || | || || | || ||||| ||||| ||||| || || || Sbjct 2664 CGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTG 2723 Query 81478 GCGCGCACCTTGCTGATTGA----AAGACCGATGCCACCTGACCACTTTGAAATCTGAGC 81533 || || | ||| ||| || |||||||| || || | | ||| || ||| || Sbjct 2724 GCACGGA---TGC-GATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGC 2779 Query 81534 ACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAA 81593 ||| || | ||| || || |||||||| ||||| || | ||||| |||| || ||| Sbjct 2780 ACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAA 2839 Query 81594 ACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAAT 81653 || |||| ||||| || |||||| ||||| || || |||| ||||| | Sbjct 2840 GCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGT 2899 Query 81654 GAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTG 81713 ||| | | | ||||| |||| |||||||| |||| || ||| | |||||| Sbjct 2900 GAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA 2959 Query 81714 AATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 ||||| | ||| |||||||| | ||||| ||| ||| ||||| Sbjct 2960 GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCG 3002 >seq5079 Length=14806 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || || || |||||||| ||||| | ||||| ||||| Sbjct 10341 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 10400 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| | || || |||||||||||||| |||||||| ||||| Sbjct 10401 GATACCATCGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 10460 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || ||||| ||||| ||||| || ||||| | ||| ||||| | ||||| || Sbjct 10461 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 10520 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||| || ||| | ||| | ||||| || ||||| Sbjct 10521 ATCCAAAAGGAGAGCACCCTCCATTTGGTCCTTCGTCTCCGTGGTGG 10567 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || |||||||| || || | ||||| ||||| Sbjct 10569 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 10628 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | || || || ||||||||||| |||||||| ||||| Sbjct 10629 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 10688 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| | ||||||| || || || | ||||| || Sbjct 10689 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 10748 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||||| || | ||| ||||||| || ||||| Sbjct 10749 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 10795 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||| ||||| | |||| ||| | || | ||| | Sbjct 10137 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACGTCAAGTCG 10196 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || ||||| ||||| |||||||| |||||||| || ||| Sbjct 10197 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAG 10256 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||||||||| | ||| || || | ||||| || |||| ||||| ||||| || Sbjct 10257 CAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGAGAGTACTCTCCAC 10316 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || ||||| Sbjct 10317 CTCGTGCTCCGCCTCCGTGGTGG 10339 Score = 136 bits (150), Expect = 5e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||||||||||||||| || || || || || ||||| || Sbjct 10797 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 10856 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | || ||||| ||||||||||| || || || ||||| Sbjct 10857 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 10916 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || ||||| || ||||| || ||||||| | ||||| | || || ||| Sbjct 10917 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACAAT 10976 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| || ||||| || || || | |||||||| || || || Sbjct 10977 ATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGGTCA 11026 >seq1345 Length=13045 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 11815 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 11874 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||| | || || |||||||||||||| || || || ||| Sbjct 11875 AGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGAC 11934 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| | || ||||| || ||||| || ||||| | | ||||| | ||||| Sbjct 11935 CAGCAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTAC 11994 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| || || || || ||||||| || ||||| Sbjct 11995 AACATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 12044 >seq3791 Length=12226 Score = 125 bits (138), Expect = 8e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || | ||||| ||||| || | || Sbjct 6535 CTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGAT 6476 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| ||||| | || ||||||||||||||||||||||| || ||||| |||||||| Sbjct 6475 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCT 6416 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || |||||||| ||||| | ||||| | ||||| || | ||||| || |||| || Sbjct 6415 TATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 6356 Query 27594 GG 27595 || Sbjct 6355 GG 6354 >seq8285 Length=7822 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 64771 TCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTG 64830 || || |||||||| || ||||| ||||||||||| |||||| | || || |||||||| Sbjct 587 TCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTC 528 Query 64831 ATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTC 64878 ||||| || || ||||| || ||| || ||||| | ||||||| Sbjct 527 ATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTC 480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570245156490240