Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734735.1_202014-07-28] 9,152 sequences; 36,003,007 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq5054 127 2e-24 seq5055 111 1e-19 >seq5054 Length=1418 Score = 127 bits (140), Expect = 2e-24 Identities = 157/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 ||||| ||||||||| | ||||| || | |||||| ||||||| |||| ||||| Sbjct 1081 GAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGCGTCGACGTGGTC 1140 Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACG 6616 ||||| || ||||| |||| |||| || |||| ||| || || | ||| | Sbjct 1141 GGCGTAGACGTGAGCATCGCCCATGACGT--GCGTCAGCGACCCGGGCACTAGACCCGTG 1198 Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || | || ||||||| ||| ||||| ||||| || ||||||||||| ||||| |||| Sbjct 1199 GCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGCACGCCTAGG 1258 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 |||||||| | || || || |||||||||||| Sbjct 1259 CCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 1291 Score = 127 bits (140), Expect = 2e-24 Identities = 157/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| |||| ||||| ||||||||||| || Sbjct 1291 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTAGGCGTGCCCTTCAACATTGCCAG 1232 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| ||||| ||| ||||||| || | || | ||| | || || ||| |||| Sbjct 1231 CTACGCACTGCTGACGCACATGATTGCGCGTGCCACGGGTCTAGTGCCCGGGTCGCTGAC 1172 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 || |||| |||| ||||| || ||||| ||||| |||| ||||||| ||| Sbjct 1171 GC--ACGTCATGGGCGATGCTCACGTCTACGCCGACCACGTCGACGCACTCCGGACGCAG 1114 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTC 34846 ||| | || ||||| | ||||||||| ||||| Sbjct 1113 CTGGAGCGCGAGCCGAGGCCGTTCCCCGAGCTC 1081 >seq5055 Length=16026 Score = 111 bits (122), Expect = 1e-19 Identities = 181/258 (70%), Gaps = 2/258 (1%) Strand=Plus/Plus Query 6866 CCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTGG 6925 ||||| |||| ||||| || | || | || || || |||||||| | ||| ||| Sbjct 1 CCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAAGTGGCGCCATTGG 60 Query 6926 AACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAGA 6985 || |||||||| ||||||| ||||||| |||| || | || ||| || |||||| Sbjct 61 AAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCCCAGCCCGTCCAGG 120 Query 6986 AAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG-AGAGCTCCTTGGT 7044 || || || |||| ||||||||||||| | |||| | | || || ||| | Sbjct 121 AACTCACGGCTGCCGTTGCCGTCCCAGATCTTGA-CCCCGGCGTCGCTCAGGGGCTTCGC 179 Query 7045 GTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACACG 7104 ||| || ||| |||||||||||||||||| || |||| || | || | || || Sbjct 180 CGACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGCCCGCGAGAAGACGCG 239 Query 7105 TTTCGTCGTCAGCAGCGG 7122 |||||||||||||| || Sbjct 240 CTTCGTCGTCAGCAGAGG 257 Score = 111 bits (122), Expect = 1e-19 Identities = 181/258 (70%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || |||||||||||||| || || | || | || |||| || ||||||||||||||| Sbjct 257 CCTCTGCTGACGACGAAGCGCGTCTTCTCGCGGGCCGTGATCCTCGAGCTGCTGTGGTTC 198 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCT-CGTCCCGGGGGGTGAAGATCTGGGACGC 34341 ||| ||| || ||| | ||| || || | | |||| | ||||||||||||| Sbjct 197 GTGTCGGGCGCGACGTCGGCGAAGCCCCTGAGCGACGCCGGGG-TCAAGATCTGGGACGG 139 Query 34342 TCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTT 34401 |||| || || || |||||| || ||| || | || |||| ||||||| | Sbjct 138 CAACGGCAGCCGTGAGTTCCTGGACGGGCTGGGATTGCAGCACCGCGAGGTGGGCGACCT 79 Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGC 34461 |||||| |||||||| ||||| ||| | |||||||| || || || | || | || Sbjct 78 GGGCCCCGTCTACGGCTTCCAATGGCGCCACTTTGGCGCCGAATACACCGACTGCCACGC 19 Query 34462 GGACTATTCGGGACAGGG 34479 ||||| |||| ||||| Sbjct 18 AGACTACACGGGCCAGGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448211118781440