Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734755.1_202014-07-28] 9,277 sequences; 36,003,397 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq9011 318 5e-82 seq738 140 3e-28 seq5584 86.0 6e-12 >seq9011 Length=4648 Score = 318 bits (352), Expect = 5e-82 Identities = 1205/1882 (64%), Gaps = 26/1882 (1%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| || | | ||||| | | || || || || |||||||| Sbjct 1273 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATGCC 1332 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| ||||| | |||||| || ||||| ||||| || | || || |||| Sbjct 1333 GGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGG 1392 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | |||| |||||| ||| || || || || || || || ||||| Sbjct 1393 GTCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGC 1452 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | | | ||||| ||| || ||||| || |||||||| || | | || | || Sbjct 1453 CATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATC 1512 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 || || | || |||||| ||| || | | ||||| || || || Sbjct 1513 CTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCAT 1572 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 || ||||| ||| | || || ||| |||| || |||| || || || Sbjct 1573 GTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTACCTG 1632 Query 22465 AAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 |||||||||| |||| || |||||||||||||||||||| || | || || || | | Sbjct 1633 GAACTCGCCGG-CAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACT 1691 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||||| || || || || | || ||| || ||||| || || | || | || Sbjct 1692 CGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGT 1751 Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 | | | || || | |||| || || |||| || ||||||||| || || || Sbjct 1752 TGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTC--CCAGTCCCAGAGGTCTGA 1809 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 ||| | || || |||||| ||||| || | | || | | || || || Sbjct 1810 AGGCTTGACGTT---CCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTC 1866 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| || ||| ||||| | | | ||||| | ||| || || || ||| Sbjct 1867 GTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTG 1926 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGTACG 22817 || || ||||| ||||| |||||||| | || || || ||| ||| | | Sbjct 1927 GTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGAC----TCGAAAG 1982 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 ||| ||| | | ||| ||||| |||| ||| || ||||| | |||||| || | || Sbjct 1983 GCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTGT 2042 Query 22878 TTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCT 22935 || || | || |||||| | | || || | || ||||| | | Sbjct 2043 GGCGCATGTTG--CTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGATCTT 2100 Query 22936 GTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC 22995 ||| | ||| | || | || || | ||||||||||| | || Sbjct 2101 GTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTCACC 2160 Query 22996 CGATTG-TA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTC 23052 | || || | || |||| | | || | || ||||| |||||||| || ||||| Sbjct 2161 CTTGTGGTAGTCGACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATACAGCAACCTC 2220 Query 23053 GTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAA 23112 ||| || | |||||| | ||| || || || || ||| | || || || | Sbjct 2221 GTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAATGGTACCAAG 2280 Query 23113 ATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGT 23172 || |||||||||| || || ||||| ||||||||| |||||| |||| | || || Sbjct 2281 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGT 2340 Query 23173 CTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTA 23232 ||| ||| | ||| | ||| | ||| | |||| || | | |||| || Sbjct 2341 CTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCTTGAT-CGTCTTGCGAC 2399 Query 23233 CCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGG 23291 ||| || | | ||| ||||| | |||| || || || || ||||||| ||||| | Sbjct 2400 CCTTACCGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCCG 2459 Query 23292 CCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTC 23351 | ||||| || | | |||| ||||| | |||| || || |||||||| Sbjct 2460 CGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCT 2519 Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || ||||| || ||||| |||||| |||||| || ||||| || | |||||| | Sbjct 2520 TCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCT 2579 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| |||||| | | || | || || || || || || ||||||||||| |||| Sbjct 2580 TTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGT 2639 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | |||||| || || || | ||| ||||| ||||| |||||||| || || ||||||| Sbjct 2640 AGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGT 2699 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 || |||| | ||||| || || | ||||| || | |||| || || | | | Sbjct 2700 TGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGG 2759 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | || | || || | | || |||| || ||| || || || || || || |||| Sbjct 2760 AGCCAGTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCA 2819 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 | || || || || ||||||||||| ||||| |||||||| || || | | |||| Sbjct 2820 TGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCA 2879 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 ||| || || |||| || || | || || |||| ||| || |||||| ||||| Sbjct 2880 GGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGT 2939 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831 | || ||| || | ||||| || ||||| || |||||| | ||||||| || | Sbjct 2940 GTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCAC 2999 Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGT 23891 | ||||| | || || ||||| ||||||| || || |||||||| | ||| | Sbjct 3000 CCCAGATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCAT 3059 Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951 | | || || || || || | | | || || || || ||||| | ||||| || | Sbjct 3060 TGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAAT 3119 Query 23952 CACGATCGTGCACTATGGCCGA 23973 |||| |||| || || || || Sbjct 3120 CACGGTCGTAGACAATAGCTGA 3141 >seq738 Length=7857 Score = 140 bits (154), Expect = 3e-28 Identities = 305/455 (67%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || ||||| ||||| | |||||| ||||| ||||| || ||||| | || || Sbjct 7174 CTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCATCTTC 7233 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| || ||||||||||| || ||||| || ||||||| | || ||||| Sbjct 7234 TGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCGCGT 7293 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG 58154 || |||||||| || || || ||||| || || ||| ||| | | | ||| | || Sbjct 7294 GATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCC 7353 Query 58155 ACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | ||| | ||| ||| | ||| || ||| ||| || | |||||| | Sbjct 7354 AACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTT 7413 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || | || ||| | || || |||||| | ||||| |||||||| Sbjct 7414 ACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACCTGATGAAGCAGTACATT 7473 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 |||||||| || ||||||||| | ||| || || |||| ||| ||| | | Sbjct 7474 GAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGGAAACGAGAAGGTC--TACCGTGCCA 7531 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || ||||||||| | ||||| |||| |||||||| ||||| ||||| | Sbjct 7532 CCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGACCAACTTCTTCGAGA 7591 Query 58393 aaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 || ||| |||| || |||||| ||| || ||| Sbjct 7592 AACGCGTTGGCGAGTACCAAAAAGCCGGTGTCATG 7626 >seq5584 Length=12196 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||||||||| ||||| || |||||| | || || || | || |||| || Sbjct 6537 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 6478 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | || || | || ||||||||| || | || || ||||| |||||||| Sbjct 6477 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 6418 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGAC 31348 || || |||||||| |||||||| ||| Sbjct 6417 ATCTTTGCTGGCAAGCAGTTGGAGGAC 6391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445714707813840