Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734755.1_202014-07-28] 9,277 sequences; 36,003,397 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2562 91.5 1e-13 >seq2562 Length=7159 Score = 91.5 bits (100), Expect = 1e-13 Identities = 185/271 (68%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAA 30174 ||||| || || ||| |||| ||||||||| ||| ||||| || || || || Sbjct 75 AGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAAG 134 Query 30175 TGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 30234 || | ||| ||||| ||||| || || |||||||| ||| | || | ||||| || ||| Sbjct 135 TGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCCC 194 Query 30235 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCGG 30292 | ||||| || || | | |||||| ||||||||||||| ||||| | || | Sbjct 195 AGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGCTC 254 Query 30293 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 30352 || | ||| | | || | || ||||||||||||||||| | |||||| Sbjct 255 AG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGCCC 312 Query 30353 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | | ||||| | ||| ||||| || || || Sbjct 313 GCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408571400289521