Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734785.1_202014-07-28]
8,427 sequences; 35,801,870 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq2116 114 3e-20
>seq2116
Length=15464
Score = 114 bits (126), Expect = 3e-20
Identities = 257/388 (66%), Gaps = 20/388 (5%)
Strand=Plus/Plus
Query 254011 TGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAA 254070
|||| ||| |||| |||||||| || || ||||| || ||| |||| |||||||||
Sbjct 222 TGCTCTTCTACGGCCCTCCCGGCACGGGTAAGACCTCGACCGTCCTCGCGCTGGCCAAGG 281
Query 254071 CCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAAC 254130
|| || ||| || ||||| ||||||||| ||||| ||||| || |||||||
Sbjct 282 AGCTTTTCGGCCCGGAACTCATGAAGTCGCGCGTGCTGGAGCTCAACGCCTCGGACGAAC 341
Query 254131 GCGGGTTGGACGTCGTCCGCGACAAGATCAA-GACTTTCTCCAAGATGTCGATTTCGTCG 254189
| || | | |||| || || ||| |||| |||||| || ||| | | |
Sbjct 342 GTGGCATCTCCATCGTGCGAGAAAAGGTCAAAGACTTTGCCCGC-ATGCAGCTCACCAAC 400
Query 254190 TTCCAACCCGGCT------------------GTCCGCCTTTCAAGCTCGTGATCCTGGAC 254231
|| ||||||| | ||||| |||||| | | ||||| |||
Sbjct 401 CCCCCGCCCGGCTACAAGTCGAAGTACCCATGCCCGCCCTTCAAGATTATCATCCTCGAC 460
Query 254232 GAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCAC 254291
||||| ||| ||||||| ||||||||| ||| || || | || |||||||| ||
Sbjct 461 GAGGCCGACTCCATGACCCAGGACGCGCAGAGCGCTCTGCGAAGGACCATGGAGACTTAC 520
Query 254292 TCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTG 254351
| | ||||| || || ||| | ||||||||||| | ||||||| || |||
Sbjct 521 AGCAAGATCACGCGGTTCTGTCTGATCTGCAACTACGTCACTCGCATCATCGATCCCCTG 580
Query 254352 GCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|| || ||||| ||| ||||| ||||
Sbjct 581 GCATCCAGGTGCAGCAAATTTCGCTTCA 608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073650464435136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |