Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734785.1_202014-07-28] 8,427 sequences; 35,801,870 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4573 138 2e-27 seq3153 127 3e-24 >seq4573 Length=4576 Score = 138 bits (152), Expect = 2e-27 Identities = 338/511 (66%), Gaps = 10/511 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| ||||| | || || |||||||| || Sbjct 2644 CAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCAGAT 2585 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | | || ||| || || ||| || ||| | ||| Sbjct 2584 GTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGATTCGTGCCCGTGAC 2525 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || || ||| | || ||| |||||||||||||||| | | ||| || Sbjct 2524 CTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTGAGAAAAACGGCGAC 2465 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| | | |||||||| || || || || || | || |||| || |||||||| Sbjct 2464 TGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTGAAGAGTTC 2405 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-----CGTGAGACGAGTCGATG 97170 ||||| ||| | || ||||| ||||| || || |||||| || | | Sbjct 2404 GAGGCTCTGTATGAGAAGTATGAGCA----GGCCGGTAAGGGTCGCAAGACGA-TCAAGG 2350 Query 97171 CACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | | |||| ||| | ||||| || ||||||| |||||||| | |||| ||| | Sbjct 2349 CCCAGAAACTTTGGTATTCCATCCTGGAGGCTCAGACTGAGACTGGTAACCCGTTCATGC 2290 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | ||||||||| | || ||||| |||||||| || | || ||||| ||| Sbjct 2289 TGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCGCAGCT 2230 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 |||| || |||||||| ||| | |||||| | | || |||||| || || ||| | Sbjct 2229 CCAACCTCTGCACGGAGATTATCGAGTACTCTGCCCCTGACGAGGTTGCTGTATGCAACC 2170 Query 97351 TGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 | || || | ||||||| |||| || || Sbjct 2169 TTGCTTCCCTGGCTCTGCCCCAGTTCGTCGA 2139 >seq3153 Length=7373 Score = 127 bits (140), Expect = 3e-24 Identities = 203/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| | |||||||| ||||| ||||||| || ||||||| ||||||| | ||| ||||| Sbjct 6240 TGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGCCGAAGAGATTGATTTGTCC 6299 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||||| || |||| ||| | | | || || ||| | || || || ||| Sbjct 6300 AAGGATCTCCACGACTGGAACAACAAGCTCACAGATGATGAAAAGTACTTCATCTCACAC 6359 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATT 125200 || | || ||||| |||| || ||||| ||||||||||| || || ||||| ||||| Sbjct 6360 ATCCTTGCATTCTTCGCCGCTTCTGATGGCATCGTCAACGAGAACCTCGTTGA-GCGATT 6418 Query 125201 C-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTG 125259 | | | ||| | ||||| |||| ||||| ||||| ||||| |||||||| | Sbjct 6419 CAGCGCCGAAGTCCA-GATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATGG 6477 Query 125260 AGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||||| | ||||| || | ||||| ||||| |||| |||||| Sbjct 6478 AGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTACAT 6523 Score = 127 bits (140), Expect = 3e-24 Identities = 347/529 (66%), Gaps = 17/529 (3%) Strand=Plus/Plus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| | |||||||| ||| | ||||| | | ||| Sbjct 6647 ATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACCTTTGCC 6706 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | ||| | || ||||| | ||| ||||| |||||||| ||| |||||| || Sbjct 6707 ACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCC 6766 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| |||||||||||||| || || ||||| || ||||| | |||||| | || Sbjct 6767 ATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATC 6826 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCG 125599 || || || ||||| |||||| ||||||||| ||| ||||| |||| Sbjct 6827 TCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGC----------- 6875 Query 125600 TCCCG-AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGA 125658 ||| | | ||| ||| | | || || | | ||||| |||||| || | || Sbjct 6876 TCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGA 6935 Query 125659 TAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGC 125718 | || ||||||||||| || || | | || | | | | ||||||||| ||| | Sbjct 6936 TTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACC 6995 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCA 125778 | ||| ||||||| |||||||| || || | || || || || | | Sbjct 6996 TGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGGAAACGAGA 7055 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 || | ||| |||| || || || ||||| ||| | ||| ||||| | || |||| Sbjct 7056 AGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGA 7115 Query 125839 CCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 ||||||| |||||||| || |||||||| ||| || ||||||| Sbjct 7116 CCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAAAAAGC--CGGTGTC 7162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740981138676520