Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734785.1_202014-07-28] 8,427 sequences; 35,801,870 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq6459 102 7e-17 seq1280 89.7 4e-13 >seq6459 Length=13520 Score = 102 bits (112), Expect = 7e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC-GCTCGTCCTC 48576 || ||||| || |||||||||||||| |||||||| || | || ||| | ||||||| Sbjct 10520 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA-AAGGGTCCGACCGTCCTC 10462 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || |||| | || || || ||| || | || ||||||||| Sbjct 10461 AAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTG 10402 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || ||| ||| | | | |||||||||| ||||| ||| | || || || || Sbjct 10401 GATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTT 10342 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| ||||| || ||||||||||| Sbjct 10341 GCCAGTGAGGGTTTTGACGAAAATCTGCAT 10312 >seq1280 Length=26117 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTC--GCTCGTCCTCCAGCT 48581 || || ||||||||||| || |||||||| || | | | ||| || ||||||| |||| Sbjct 12098 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC-AGGGTCCTGC-CGTCCTCAAGCT 12041 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| ||| | | || || |||||||| ||| || | || ||||||||| || | Sbjct 12040 GCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCT 11981 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 | ||||| | | ||||| ||| | |||||| ||| | || || || || || | Sbjct 11980 TGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCG 11921 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || || || |||||||| Sbjct 11920 TGAGGGTCTTGACGAAGATCTGCAT 11896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421207935790427