Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734785.1_202014-07-28] 8,427 sequences; 35,801,870 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq4573 387 3e-102 seq3153 190 4e-43 >seq4573 Length=4576 Score = 387 bits (428), Expect = 3e-102 Identities = 1127/1716 (66%), Gaps = 71/1716 (4%) Strand=Plus/Plus Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||| | ||| || | |||| |||| |||| |||||||||||||||||||||||| Sbjct 1252 TGAACTGAATCGGCTGGG-CGGCTGCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGAGA 1310 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 ||| |||| || || ||||| | || | ||| ||| ||||| Sbjct 1311 CCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCAT-----------GGTCG 1359 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919 |||| || || |||||| |||||| |||||| | ||||| | || || ||| Sbjct 1360 GG-TCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCG 1418 Query 243920 GCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978 ||||| | || ||| | | || || ||||| | | |||||||||| |||| Sbjct 1419 GCCATCTGAACGACGGTACGT-TGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGT 1477 Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038 | ||| |||| | | |||||||| | ||||| | | |||||| || | Sbjct 1478 ATCCTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTT 1537 Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCT-CCAGCGCCTCGA----CCAGGTGCCTGTTC 244093 ||||| || |||||| || |||| | |||| ||| || ||||| | || Sbjct 1538 CATGTCGTCTGACCACAGACC-AAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTG 1592 Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153 || ||||| ||||| || | ||||| ||||| ||||| | |||| | ||||| Sbjct 1593 ACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCA 1652 Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213 | || ||| ||||||| || || || | |||||| || || |||||||| | || ||| Sbjct 1653 AAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGC 1712 Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273 | ||||| | || || || || |||| | |||| ||| ||||||||| | | Sbjct 1713 AAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAGAGG 1772 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333 | || ||| |||| | ||||||||| |||| || | |||| || Sbjct 1773 TCTGA-AGGC--------TTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACA 1823 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTC 244392 || |||||||| |||| ||| ||||| | || || ||||| || | ||| Sbjct 1824 GGAGATCCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTC 1883 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 || || |||| |||||||||||| |||||| ||||||| | || || |||| | | | Sbjct 1884 -AGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCT--CAGGA 1940 Query 244453 GGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || | | | | ||| |||| ||||| || || ||||| | ||| Sbjct 1941 GACTCGAAAGGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCG 2000 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 || || ||||| ||| ||||| | || || || | || |||||||| ||||| | || Sbjct 2001 ATAGGCCTGTGGCGCATGTTGCTGTTGCGTGCCTCCTGG-ACGGGGTAGTAGTTGACTTC 2059 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629 ||| | ||||||||||||||| | | | ||| || || || |||||| Sbjct 2060 GATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTC 2119 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 ||| || | ||| | |||| || || |||| | || || | | || Sbjct 2120 GTATTC------ACCCTTG----TGGTAGTCG--ACGAACTGGGGCAGAGCCAGGGAAGC 2167 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 |||||||| || || ||||| || | | | ||||| || |||||| ||||||||||| Sbjct 2168 AAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTT 2227 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 || ||||| || |||| || || ||| |||| ||||||| |||||||| Sbjct 2228 GGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTA 2287 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 |||||||| || || ||||| ||| || | |||| | | ||| || | | Sbjct 2288 CAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTG 2347 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 ||||||| |||| ||||| |||| || | ||| || ||||| |||||||| Sbjct 2348 GGCCTTGATCGTCTTGCGACCCTTACCGGCCTGCTCATACTTCTCATACAGAGCCTCGAA 2407 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989 ||| || || || | ||||| |||||| ||||||||| | |||| || Sbjct 2408 CTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTC 2467 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 |||| | || || | || |||||| || || |||||||| || || |||| ||||| Sbjct 2468 GCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTC 2527 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | || | ||| ||| || ||||||||| || || | || || ||||| || Sbjct 2528 ACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATC 2587 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 ||||||| ||||| | ||||| || | ||| ||||| ||||||||||| |||||||| Sbjct 2588 TGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTC 2647 Query 245170 CACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225 | | | ||||| |||||| | ||||| | || || |||||||| ||| Sbjct 2648 GA----CGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGG 2703 Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATG 245281 ||||||||| || ||| |||| ||| || | | || ||| ||||||| | Sbjct 2704 TGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCAC---GGATGC-GATGGACGTTGAGA 2759 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | ||||| || ||||||||| | ||| || |||||| |||||| || ||| Sbjct 2760 CCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCC 2819 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || |||||||| |||||| | | ||| ||||| || |||| ||| | || || || Sbjct 2820 TCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTG 2879 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | |||||| || || ||| |||||| || ||| Sbjct 2880 CCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAG 2915 >seq3153 Length=7373 Score = 190 bits (210), Expect = 4e-43 Identities = 360/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 ||||||||| |||||||| |||||||| || | |||||| | | | || | |||| Sbjct 6641 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATC-ACCGACAAGAAGTCAAC 6699 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | | ||| | || || | | ||||||||| ||||||||| || || || Sbjct 6700 CTTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTT 6759 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAAC 42809 ||||||||||||||||||||| || ||| | |||||| || || || ||||| ||| Sbjct 6760 TGCCTCCATCTTCTGGCTCAAGAAG--CGTGGCCTGATGCCTGGTCTGACTTTCTCCAAC 6817 Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869 || |||||| | || ||||| || || | ||||||||||| |||||||||||| Sbjct 6818 GAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCG--- 6874 Query 42870 CACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 | ||| | ||| |||| |||||| || || || | || || || || Sbjct 6875 CTCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAG 6934 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC 42989 || ||| | ||||| || ||| || || ||||| |||| | ||||||||| | || Sbjct 6935 ATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAAC 6994 Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGAC-CATCTCCTGT-GCCAGATGGGTCTC- 43046 || ||| ||||||| ||| ||||| ||| | || ||| ||| |||| | Sbjct 6995 CTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTGGGAAACG 7052 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 || | ||||| | | ||| ||||| ||||||||||||||||| | | ||| Sbjct 7053 AGAAG-GTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGC 7111 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| |||||||| ||||| | ||| ||||| Sbjct 7112 AAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCA 7149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944239725669520