Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19]
284 sequences; 42,306,689 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 2e-24
>seq3
Length=2329954
Score = 127 bits (140), Expect = 2e-24
Identities = 196/275 (71%), Gaps = 6/275 (2%)
Strand=Plus/Plus
Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054
||||||||| |||||||| ||| ||| |||| | | |||| ||| |||| || ||
Sbjct 794699 GAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAA 794758
Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC-CCCAGCC 146113
||| | ||| ||||| ||||||||||| |||||||| || ||| | |||| | | ||
Sbjct 794759 GTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCC 794818
Query 146114 CGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGC 146171
| |||| | | ||||| || ||| |||||| |||||||||||||||| || | ||||
Sbjct 794819 CAGCCC-GTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGC 794877
Query 146172 GGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCC 146231
|| | || | ||| | ||| | |||||| |||||||| || || |
Sbjct 794878 TCAGGG--GCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGC 794935
Query 146232 CCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
|| | ||||||| | ||| || |||||||| ||||
Sbjct 794936 CCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGGGA 794970
Score = 122 bits (134), Expect = 1e-22
Identities = 124/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749
|| ||||||| | ||||||||| || || |||| |||||| | | ||||||| |
Sbjct 794313 TCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCACT 794372
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|| |||||| | || | ||||| |||||||| | ||||||||| ||||||||||||
Sbjct 794373 AGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGC 794432
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
|| || || |||||||| | || |||||||| |||||||||
Sbjct 794433 ACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 794474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590074705227360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |