Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19] 284 sequences; 42,306,689 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq6 194 2e-44 seq2 87.8 2e-12 >seq6 Length=1879074 Score = 194 bits (214), Expect = 2e-44 Identities = 468/705 (66%), Gaps = 20/705 (3%) Strand=Plus/Plus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || ||||| || || | ||| |||||||| | ||| || |||| | || || || ||| Sbjct 1175250 AGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTC 1175309 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || || |||||||| ||||||||||| | || || || | || | | ||||| ||| Sbjct 1175310 ATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTT 1175369 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| | || ||||||||| | | | ||| | |||||||| || | ||| Sbjct 1175370 CCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAG 1175429 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | || || || ||||| || ||||| || | ||| | ||| ||||| || Sbjct 1175430 ATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTG 1175489 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | || ||| |||| ||| || || || || || ||||| || | ||||||| Sbjct 1175490 AACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAG 1175549 Query 63320 CCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 ||| ||||||| || | | ||| ||||| || || || ||||| || ||||| | Sbjct 1175550 CCAGTGGCACGGATGCGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCA 1175607 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | || || ||||| ||||| || || || ||| |||| | || | Sbjct 1175608 TGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCA 1175667 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || || |||| || | || || || || || | || || || |||| Sbjct 1175668 GGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGT 1175727 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT------AT 63551 | || || |||| ||| | || ||||| || || || || || || | Sbjct 1175728 GTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCAC 1175787 Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611 |||| || ||||| || |||||||| | ||||||||| || || || || |||| Sbjct 1175788 CCCA------GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCT 1175841 Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 63669 || || | ||||| | ||| || | || | ||| || || || ||||| | ||| Sbjct 1175842 TGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGT 1175901 Query 63670 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714 ||||| || || ||||| | |||| | |||| ||| | ||||| Sbjct 1175902 TGAAA--TCACGGTCGTAGACAATAGCTGAGTCGAGATCCTCCTT 1175944 >seq2 Length=2798306 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/254 (68%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017 || || |||||||| || || || || || ||||||||||| | ||||||| |||| Sbjct 1996450 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATC 1996391 Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077 || ||||| | | ||||| || | | || || || || || || ||| || || Sbjct 1996390 TGGACTTCGGCGCTGAATCGCTCAACGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCG 1996331 Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAG---TTTATTCCAA 33134 || || || | | ||| || || || ||||| || ||| || || ||||| Sbjct 1996330 AAGAATGCAAGGATGTGTGAGATGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAG 1996271 Query 33135 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 33194 || | || ||| || || | ||| | ||||| | ||||| ||||| ||||| ||||| Sbjct 1996270 TCGTGGAGATCCTTGGACAAATCAATCTCTTCGGCCGTCCAGAATGAGGCCTCGGCCTTC 1996211 Query 33195 TTATACATATTCCA 33208 || ||||| | ||| Sbjct 1996210 TTGTACATCTGCCA 1996197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633629750606400