Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19] 284 sequences; 42,306,689 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq40 156 5e-33 seq8 123 3e-23 seq11 95.1 1e-14 >seq40 Length=204423 Score = 156 bits (172), Expect = 5e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| || || | || |||||||| ||||| ||||||||||| || || | | Sbjct 88647 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCC 88706 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||||||||| || ||||||||||||||||| | || | | |||||| Sbjct 88707 GTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 88766 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| | | | ||||||||||| ||||| || | ||||| Sbjct 88767 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 88826 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| || || || || ||||| ||||| Sbjct 88827 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 88862 >seq8 Length=1800666 Score = 123 bits (136), Expect = 3e-23 Identities = 141/187 (75%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | ||||||||||| ||||| ||||||||||| || || || |||| || Sbjct 506507 CACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTC 506566 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||| ||||||||||| || || | ||||| ||||| | || | | |||||||||| Sbjct 506567 GAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTG 506626 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||||| ||| | | | || ||||| || ||||| || | |||||||| | Sbjct 506627 GATCTTCGACTTGA-CGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCT 506685 Query 46563 TGCCCGT 46569 |||| || Sbjct 506686 TGCCAGT 506692 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||| |||| ||| ||||||||||| ||||||||||| || ||||| | Sbjct 506045 ACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCC 506104 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || | |||||| || ||||| |||| ||||| ||||| | || | | |||||| Sbjct 506105 ATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTT 506164 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 ||| |||||| || | | | | |||||| || || || |||| |||||| Sbjct 506165 GTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGAT 506224 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||||||||| || || || ||||| ||||| Sbjct 506225 GGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 506260 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| | || |||||||||||||| ||||||||||| || || || |||| || Sbjct 506280 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 506339 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || ||||| || | ||| || ||||| | || | | |||||||||| | Sbjct 506340 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 506399 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | || ||| || || || |||| || || || ||| Sbjct 506400 ATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTG 506459 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || ||||| || || || ||||| Sbjct 506460 CCAGTGAGGGTTTTGACGAAAATCTGCAT 506488 Score = 105 bits (116), Expect = 8e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| || |||| || |||||| || |||||||| || || || || | | Sbjct 505817 ACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCTTCC 505876 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||| || || ||||| || || ||||| | ||| | | |||||| Sbjct 505877 ATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTT 505936 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| ||||| |||| ||| | | | ||||| ||||| || || | |||| Sbjct 505937 GTCTTGAATCTTTGATTTGA-CGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGA 505995 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||||| || ||||| || || ||||||||||| Sbjct 505996 TGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 506032 >seq11 Length=1460827 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| ||||| || |||| || | ||||||||| || || | Sbjct 1036879 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGA 1036938 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | | ||||| ||||| | || | | |||||||||| ||||| ||| | | Sbjct 1036939 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 1036998 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| || || || |||| |||||||| ||||| ||||| || || || | Sbjct 1036999 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 1037058 Query 46584 AG 46585 || Sbjct 1037059 AG 1037060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565236393403680