Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000805855.1_202014-12-19]
284 sequences; 42,306,689 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq3 102 1e-16
>seq3
Length=2329954
Score = 102 bits (112), Expect = 1e-16
Identities = 270/404 (67%), Gaps = 14/404 (3%)
Strand=Plus/Plus
Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATG-GCGGGCAGGTCCGCGG 147163
||||||||||| ||| | ||||||||||||||||| |||| || | |||||| ||
Sbjct 794574 ACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGCAGGACCATAAGCTTG-AGGTCCTTGG 794631
Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223
||||||| || | |||| || | | | |||||| | | || | |
Sbjct 794632 GGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCGTGCGGAGCTTGTGCA--- 794688
Query 147224 CCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTAC 147279
| ||||| |||||||| |||||||||||| ||||| || |||||| |||
Sbjct 794689 -CGACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTAT 794747
Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339
||| |||||||| | ||| ||||||||||| || || ||||||||||| || | |
Sbjct 794748 TCGGCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGG 794807
Query 147340 TGCGAGAAGCCC-GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCAC 147398
||| || ||| ||||| | || ||||| || |||| | |||||||||| ||
Sbjct 794808 TGCTGCAATCCCAGCCCG-TCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGAC 794866
Query 147399 TCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458
|| | || || ||| | ||| | |||| | |||||| ||||||||
Sbjct 794867 CCCGGCGTCGCTCAGGGGCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAG 794926
Query 147459 CAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502
| || ||| | | ||||| | ||| || |||||||| ||||
Sbjct 794927 GATCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGGGA 794970
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931
|||| ||||| |||||| || | || | | ||||||| | || | || |||
Sbjct 794259 ATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGCGTCGACG 794318
Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991
|||| | ||||||||| || || |||| | |||| | ||| ||| || ||
Sbjct 794319 TGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCACTAGACCC 794378
Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051
|| | | || | ||||| || ||||| | ||||||||| ||||||||||| || ||
Sbjct 794379 GTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGCACGCCT 794438
Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
||||||||||| | |||| |||||| ||||||||
Sbjct 794439 AGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 794473
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583485928617600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |