Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04]
1,661 sequences; 40,306,145 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1226 199 5e-46
>seq1226
Length=64016
Score = 199 bits (220), Expect = 5e-46
Identities = 466/700 (67%), Gaps = 20/700 (3%)
Strand=Plus/Minus
Query 63221 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAA 63280
||| || || | ||| |||||||| | ||| || |||| | || || || ||||| ||
Sbjct 8068 AGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAA 8009
Query 63281 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGT 63340
|||||||| ||||||||||| | || || || | | | | ||||| |||||
Sbjct 8008 CAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTG 7949
Query 63341 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63400
||||| | || ||||||||| | | | ||| | |||||||| || | ||| |||||
Sbjct 7948 GTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGC 7889
Query 63401 CATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63460
| | || || || ||||| || ||||| || | ||| | ||| ||||| || | ||
Sbjct 7888 AAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACAC 7829
Query 63461 TCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACT 63520
| || ||| |||| ||| ||||| || | || |||||||||| ||||||| ||| |
Sbjct 7828 ACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGT 7769
Query 63521 GGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578
|||||| || | | ||| ||||| || || || ||||| || ||||| | ||
Sbjct 7768 GGCACGGATGCGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCATGGCA 7711
Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638
|| || | ||||| ||||| ||||| ||||| || || |||| | || || ||
Sbjct 7710 CAAGTCTTGAGGGTGTCGTAGATTCCTTCAATGCTGTCGTCCTTCATATCAACCAGGAAG 7651
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698
|| |||| || | | || || || || || | || || || ||||| ||
Sbjct 7650 CATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTG 7591
Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT------ATCCCAT 63752
|| |||| ||| | || ||||| || || || || || || | ||||
Sbjct 7590 AAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA- 7532
Query 63753 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTG 63812
|| ||||| || |||||||| | ||||||||| || || || ||||| |||
Sbjct 7531 -----GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCA 7477
Query 63813 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 63870
|| | ||||| | ||| || | || | ||| || || || ||||| | ||| |||||
Sbjct 7476 TTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAA 7417
Query 63871 AGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTT 63910
|| || ||||| | |||| | || | ||| | |||||
Sbjct 7416 --TCACGGTCGTAGACAATAGCTGAGTCGAGATCCTCCTT 7379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629804523412080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |