Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04] 1,661 sequences; 40,306,145 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1226 179 5e-40 >seq1226 Length=64016 Score = 179 bits (198), Expect = 5e-40 Identities = 463/702 (66%), Gaps = 20/702 (3%) Strand=Plus/Minus Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071 ||||| || || | ||| |||||||| | ||| || |||| | || || || ||||| Sbjct 8070 CCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATG 8011 Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 || |||||||| ||||||||||| | || | || | || | | ||||| ||||| Sbjct 8010 AACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCG 7951 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 ||||| | || ||||||||| | | | ||| |||||||| || | ||| ||| Sbjct 7950 TGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 7891 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | | || || || ||||| || ||||| || | ||| | ||| ||||| || | Sbjct 7890 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAAC 7831 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311 || | || ||| |||| ||| || || || || || ||||| |||| ||||||| ||| Sbjct 7830 ACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCA 7771 Query 66312 CTTGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369 | ||||| || | | ||| ||||| || || || ||||| || ||||| | | Sbjct 7770 GTGGCACGGATGCGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCATGG 7713 Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429 | || || | || || ||||| || || || || || ||| |||| | || || | Sbjct 7712 CACAAGTCTTGAGGGTGTCGTAGATTCCTTCAATGCTGTCGTCCTTCATATCAACCAGGA 7653 Query 66430 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 66489 | || |||| || | || || || || || | || || || ||||| | Sbjct 7652 AGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTG 7593 Query 66490 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT------ATCCC 66543 | || |||| ||| | || ||||| || || || || || || | ||| Sbjct 7592 TGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCC 7533 Query 66544 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 66603 | || ||||| || |||||||| | ||||||||| || || || || |||||| Sbjct 7532 A------GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGC 7479 Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 66661 || | ||||| | ||| || | || | ||| || || || ||||| | ||| ||| Sbjct 7478 CATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGA 7419 Query 66662 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703 || || || ||||| | |||| | |||| ||| | ||||| Sbjct 7418 AA--TCACGGTCGTAGACAATAGCTGAGTCGAGATCCTCCTT 7379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658159134687240