Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04] 1,661 sequences; 40,306,145 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1226 138 2e-27 seq364 127 3e-24 seq854 86.0 9e-12 >seq1226 Length=64016 Score = 138 bits (152), Expect = 2e-27 Identities = 338/511 (66%), Gaps = 10/511 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || || || || | ||| ||||| | || || |||||||| || Sbjct 7859 CAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCAGAT 7918 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | | || ||| || || ||| || ||| | ||| Sbjct 7919 GTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGATTCGTGCCCGTGAC 7978 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || || ||| | || ||| |||||||||||||||| | | ||| || Sbjct 7979 CTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTGAGAAAAACGGCGAC 8038 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| | | |||||||| || || || || || | || |||| || |||||||| Sbjct 8039 TGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCTACGGTGAAGAGTTC 8098 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATA-----CGTGAGACGAGTCGATG 97170 ||||| ||| | || ||||| ||||| || || |||||| || | | Sbjct 8099 GAGGCTCTGTATGAGAAGTATGAGCA----GGCCGGTAAGGGTCGCAAGACGA-TCAAGG 8153 Query 97171 CACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | | |||| ||| | ||||| || ||||||| |||||||| | |||| ||| | Sbjct 8154 CCCAGAAACTTTGGTACTCCATCCTGGAGGCTCAGACTGAGACTGGTAACCCGTTCATGC 8213 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 | ||||||||| | || ||||| |||||||| || | || ||||| ||| Sbjct 8214 TGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTTGGTACCATTCGCAGCT 8273 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 |||| || |||||||| ||| | |||||| | | || |||||| || || ||| | Sbjct 8274 CCAACCTCTGCACGGAGATTATCGAGTACTCTGCCCCTGACGAGGTTGCTGTATGCAACC 8333 Query 97351 TGGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 | || || | ||||||| |||| || || Sbjct 8334 TTGCTTCCCTGGCTCTGCCCCAGTTCGTCGA 8364 >seq364 Length=11608 Score = 127 bits (140), Expect = 3e-24 Identities = 203/286 (71%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 125022 TGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCC 125081 ||| | |||||||| ||||| ||||||| || ||||||| ||||||| | ||| ||||| Sbjct 6712 TGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGCCGAAGAGATTGATTTGTCC 6771 Query 125082 AAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCAC 125141 ||||| || |||| ||| | | | || || ||| | || || || ||| Sbjct 6772 AAGGATCTCCACGACTGGAACAACAAGCTCACAGATGATGAAAAGTACTTCATCTCACAC 6831 Query 125142 ATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATT 125200 || | || ||||| |||| || ||||| ||||||||||| || || ||||| ||||| Sbjct 6832 ATCCTTGCATTCTTCGCCGCTTCTGATGGCATCGTCAACGAGAACCTCGTTGA-GCGATT 6890 Query 125201 C-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTG 125259 | | | ||| | ||||| |||| ||||| ||||| ||||| |||||||| | Sbjct 6891 CAGCGCCGAAGTCCA-GATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGATGG 6949 Query 125260 AGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 ||||| | ||||| || | ||||| ||||| |||| |||||| Sbjct 6950 AGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTACAT 6995 Score = 127 bits (140), Expect = 3e-24 Identities = 347/529 (66%), Gaps = 17/529 (3%) Strand=Plus/Plus Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420 || || || ||||| | |||| | |||||||| ||| | ||||| | | ||| Sbjct 7119 ATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACCTTTGCC 7178 Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480 | ||| | || ||||| | ||| ||||| |||||||| ||| |||||| || Sbjct 7179 ACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCC 7238 Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540 ||||| |||||||||||||| || || ||||| || ||||| | |||||| | || Sbjct 7239 ATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATC 7298 Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCG 125599 || || || ||||| |||||| ||||||||| ||| ||||| |||| Sbjct 7299 TCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGC----------- 7347 Query 125600 TCCCG-AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGA 125658 ||| | | ||| ||| | | || || | | ||||| |||||| || | || Sbjct 7348 TCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGA 7407 Query 125659 TAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGC 125718 | || ||||||||||| || || | | || | | | | ||||||||| ||| | Sbjct 7408 TTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACC 7467 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCA 125778 | ||| ||||||| |||||||| || || | || || || || | | Sbjct 7468 TGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGGAAACGAGA 7527 Query 125779 AGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGA 125838 || | ||| |||| || || || ||||| ||| | ||| ||||| | || |||| Sbjct 7528 AGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGA 7587 Query 125839 CCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 ||||||| |||||||| || |||||||| ||| || ||||||| Sbjct 7588 CCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAAAAAGC--CGGTGTC 7634 >seq854 Length=183273 Score = 86.0 bits (94), Expect = 9e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 127126 CGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTCACAATGTCACAATACTCAAAGGGG 127185 ||||| || || |||| |||||| || || |||||||||||||| || |||| || Sbjct 92278 CGAGGGCCCCTCAGAGACTTGTGGGTGGTCGTGGTCACAATGTCGGCGTAGCCAAAAGGT 92219 Query 127186 CCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATGTGTGCAATATCGGCCATCA 127240 ||||| ||||| ||| |||| | || |||| |||||||| || ||||||| || Sbjct 92218 CCAGGGATGACCTTGGCCGCGACCATACCCGAGATGTGTGCCATGTCGGCCAGCA 92164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741043813758360