Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04] 1,661 sequences; 40,306,145 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1138 84.2 1e-11 >seq1138 Length=24087 Score = 84.2 bits (92), Expect = 1e-11 Identities = 153/223 (69%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 25370 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 25429 |||||| ||| || ||| || || || ||||| | ||| ||||| ||| || | Sbjct 22685 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGC 22744 Query 25430 TTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTC 25489 || ||||| || |||||||||||| || |||| ||| | | || || | Sbjct 22745 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 22804 Query 25490 TAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGG 25549 ||| || || | || ||||||| ||| || || ||||||||| ||||| ||||| Sbjct 22805 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 22864 Query 25550 TACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592 || || | ||||||| | | ||||| |||||||||||| || Sbjct 22865 CACGCCTAGGCCCATGT-CGCACGACCGCTGGTAGAGCTGGCA 22906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340130714445753