Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04] 1,661 sequences; 40,306,145 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq995 140 2e-28 seq968 96.9 2e-15 seq1455 87.8 1e-12 >seq995 Length=7557 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5725 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5666 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5665 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5631 >seq968 Length=53942 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | |||||||| || |||||||||||||| || ||||| || || Sbjct 20754 CCACCACGAAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 20695 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || |||| || | || ||||| || || || ||||||||||| || | || Sbjct 20694 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 20635 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| || || ||| ||||| | || ||||| || || Sbjct 20634 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 20575 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || ||||| || || || || | |||||| ||||| ||||||||| Sbjct 20574 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 20527 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38102 ACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTC 38161 ||| | ||| | || ||||| |||||| ||||||||||||||||||| ||| | Sbjct 21199 ACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCC 21140 Query 38162 GTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTT 38221 || || | || || || ||||| || | ||||||||| || | |||| || || || Sbjct 21139 ATCCTCCAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTT 21080 Query 38222 GTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAAT 38281 ||| ||| ||| || || || | || || ||| | ||||||||| | ||| || Sbjct 21079 GTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGAT 21020 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || | || || ||||| || ||||| Sbjct 21019 GGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 20984 >seq1455 Length=46515 Score = 87.8 bits (96), Expect = 1e-12 Identities = 161/234 (69%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || ||||| ||| | || || ||||||||||| || || ||||| || || Sbjct 30964 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 30905 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | |||| || | || || |||||||| || | ||| || || || | ||| Sbjct 30904 GAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGG 30845 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTAT--CTCCACTTTCA 38267 || || || |||||| || || ||| ||||| | || || | ||| || || Sbjct 30844 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGAC--TCC 30787 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTTT 38321 || || | || ||||| || ||||| | ||| || ||||| ||||||||| || Sbjct 30786 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGATT 30733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940419517291