Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04] 1,661 sequences; 40,306,145 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1226 399 4e-106 seq364 190 4e-43 >seq1226 Length=64016 Score = 399 bits (442), Expect = 4e-106 Identities = 1129/1716 (66%), Gaps = 71/1716 (4%) Strand=Plus/Minus Query 243741 TGAACTGGA-CGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGT 243799 ||||||| | ||| || | |||| |||| |||| |||||||||||| ||||||||||| Sbjct 9251 TGAACTGAATCGGCTGGG-CGGCTGCCTGCGTCCGCAGGTAGTACATACCGGTCTTGAGA 9193 Query 243800 CCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCG 243859 ||| |||| || || ||||| | || | ||| ||| ||||| Sbjct 9192 CCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCAT-----------GGTCG 9144 Query 243860 TCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCG 243919 |||| || || |||||| |||||| |||||| | ||||| | || || ||| Sbjct 9143 GG-TCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCG 9085 Query 243920 GCCATGGTGATGA-GGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAG 243978 ||||| | || ||| | | || || ||||| | | |||||||||| |||| Sbjct 9084 GCCATCTGAACGACGGTACGT-TGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGT 9026 Query 243979 GTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCG 244038 | ||| |||| | | |||||||| | ||||| | | |||||| || | Sbjct 9025 ATCCTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTT 8966 Query 244039 CATGTTATCGTTCCACAGGCCCAAGCGCT-CCAGCGCCTCGA----CCAGGTGCCTGTTC 244093 ||||| || |||||| || |||| | |||| ||| || ||||| | || Sbjct 8965 CATGTCGTCTGACCACAGACC-AAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTG 8911 Query 244094 ACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCG 244153 || ||||| ||||| || | ||||| ||||| ||||| | |||| | ||||| Sbjct 8910 ACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCA 8851 Query 244154 ATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGC 244213 | || ||| ||||||| || || |||| |||||| || || |||||||| | || ||| Sbjct 8850 AAGCACTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGC 8791 Query 244214 AGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATG 244273 | ||||| | || || || || |||| | |||| ||| ||||||||| Sbjct 8790 AAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---- 8735 Query 244274 CCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACG 244333 |||||| | | |||| | |||||||||| |||| || | |||| || Sbjct 8734 -----GAGGTCTGAGGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACA 8680 Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-GTC 244392 || |||||||| |||| ||| ||||| | || |||||||| || | ||| Sbjct 8679 GGAGATCCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTC 8620 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 || || |||| |||||||||||| |||||| ||||||| | || || |||| | | | Sbjct 8619 -AGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCT--CAGGA 8563 Query 244453 GGT--GAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 | ||| || | | | | ||| |||| ||||| || || ||||| | ||| Sbjct 8562 GACTCGAAAGGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCG 8503 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGC-GCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 || || ||||| ||| ||||| | || || || | || |||||||| ||||| | || Sbjct 8502 ATAGGCCTGTGGCGCATGTTGCTGTTGCGTGCCTCCTGG-ACGGGGTAGTAGTTGACTTC 8444 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629 ||| | ||||||||||||||| | | | ||| || || || |||||| Sbjct 8443 GATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTC 8384 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 ||| || | ||| | |||| || || |||| | || || | | || Sbjct 8383 GTATTC------ACCCTTG----TGGTAGTCG--ACGAACTGGGGCAGAGCCAGGGAAGC 8336 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 |||||||| || || ||||| || | | | ||||| || |||||| ||||||||||| Sbjct 8335 AAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTT 8276 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 || ||||| || |||| || || ||| |||| ||||||| |||||||| Sbjct 8275 GGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTA 8216 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 |||||||| || || ||||| ||| || | |||| | || ||| || | | Sbjct 8215 CAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTG 8156 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 ||||||| |||| ||||| |||| || | ||| || ||||| |||||||| Sbjct 8155 GGCCTTGATCGTCTTGCGACCCTTACCGGCCTGCTCATACTTCTCATACAGAGCCTCGAA 8096 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989 ||| || || || | ||||| |||||| ||||||||| | |||| || Sbjct 8095 CTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTC 8036 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 |||| | || || | || |||||| || || |||||||| || || |||| ||||| Sbjct 8035 GCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTC 7976 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | || | ||| ||| || ||||||||| || || | || || ||||| || Sbjct 7975 ACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATC 7916 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 ||||||| ||||| | ||||| || | ||| ||||| ||||||||||| |||||||| Sbjct 7915 TGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTC 7856 Query 245170 CACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGT 245225 | | | ||||| |||||| | ||||| | || || |||||||| ||| Sbjct 7855 GA----CGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGG 7800 Query 245226 GGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGAC----ATG 245281 ||||||||| || ||| |||| ||| || | | || ||| ||||||| | Sbjct 7799 TGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCAC---GGATGC-GATGGACGTTGAGA 7744 Query 245282 CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCC 245341 || | ||||| || ||||||||| | ||| || |||||| |||||| || || Sbjct 7743 CCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCT 7684 Query 245342 TCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTG 245401 || |||||||| |||||| | | ||| ||||| || |||| ||| | || || || Sbjct 7683 TCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTG 7624 Query 245402 CACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | | |||||| || || ||| |||||| || ||| Sbjct 7623 CCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAG 7588 >seq364 Length=11608 Score = 190 bits (210), Expect = 4e-43 Identities = 360/518 (69%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 ||||||||| |||||||| |||||||| || | |||||| | | | || | |||| Sbjct 7113 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATC-ACCGACAAGAAGTCAAC 7171 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 || | | | | ||| | || || | | ||||||||| ||||||||| || || || Sbjct 7172 CTTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTT 7231 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTC--GATGCCCGGACTCACCTTCTCGAAC 42809 ||||||||||||||||||||| || ||| | |||||| || || || ||||| ||| Sbjct 7232 TGCCTCCATCTTCTGGCTCAAGAAG--CGTGGCCTGATGCCTGGTCTGACTTTCTCCAAC 7289 Query 42810 GAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGC 42869 || |||||| | || ||||| || || | ||||||||||| |||||||||||| Sbjct 7290 GAGCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCG--- 7346 Query 42870 CACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAG 42929 | ||| | ||| |||| |||||| || || || | || || || || Sbjct 7347 CTCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAG 7406 Query 42930 ATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGAC 42989 || ||| | ||||| || ||| || || ||||| |||| | ||||||||| | || Sbjct 7407 ATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAAC 7466 Query 42990 CTCATGTGCAAGTACATCCAGTACGTCGCCGAC-CATCTCCTGT-GCCAGATGGGTCTC- 43046 || ||| ||||||| ||| ||||| ||| | || ||| ||| |||| | Sbjct 7467 CTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTGGGAAACG 7524 Query 43047 AGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGC 43106 || | ||||| | | ||| ||||| ||||||||||||||||| | | ||| Sbjct 7525 AGAAG-GTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGC 7583 Query 43107 AAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| |||||||| ||||| | ||| ||||| Sbjct 7584 AAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCA 7621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944319593157360