Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04] 1,661 sequences; 40,306,145 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1455 86.0 5e-12 seq968 82.4 6e-11 >seq1455 Length=46515 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/138 (75%), Gaps = 4/138 (3%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| |||||||| || || || |||||||||||||| |||||||| || | Sbjct 30964 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GG 30906 Query 33960 CAATTGTC--GCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACC 34017 | ||| || |||| || | |||||||||||||| |||| ||||||||| ||| Sbjct 30905 AGAGGGTCCTGC-CGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGG 30847 Query 34018 GGCACGCTCTCTTTGTCC 34035 || | | ||| |||||| Sbjct 30846 GGGATACCCTCCTTGTCC 30829 >seq968 Length=53942 Score = 82.4 bits (90), Expect = 6e-11 Identities = 96/127 (76%), Gaps = 2/127 (2%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTC-G 33968 || || ||||| || ||||| || ||||||||||| |||||||| || | || |||| | Sbjct 20517 AGGCGGAGCACGAGGTGAAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA-AAGTGTCCG 20459 Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028 |||| || | ||||||||||||||| || || ||||| || ||| || | | ||| Sbjct 20458 ACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTC 20399 Query 34029 TTTGTCC 34035 |||||| Sbjct 20398 CTTGTCC 20392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397054362092122