Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04]
1,661 sequences; 40,306,145 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq968 120 3e-22
seq1455 114 1e-20
>seq968
Length=53942
Score = 120 bits (132), Expect = 3e-22
Identities = 146/194 (75%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| |||||||||||||||| ||| || || | || || |||||||| || || ||
Sbjct 21175 CTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAA 21116
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| | || || ||||| | || | | ||||||||| ||| | |||| ||||| ||
Sbjct 21115 GATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGTCT-TGAATCTTTGATTTGA-CG 21058
Query 42136 TCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194
| | | | ||||| ||||| || |||| |||||||||||||| || ||||||||
Sbjct 21057 TTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTG 20998
Query 42195 ACAAAGATTTGCAT 42208
|| |||||||||||
Sbjct 20997 ACGAAGATTTGCAT 20984
Score = 91.5 bits (100), Expect = 2e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
|||||||| | |||||||||||||| || ||||| || | || ||||| |||| ||
Sbjct 20736 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 20677
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| |||||||| || || || || ||||| | || | | |||||||||| |
Sbjct 20676 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 20617
Query 42120 ATTTT 42124
|| ||
Sbjct 20616 ATCTT 20612
>seq1455
Length=46515
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| ||| | || | ||||||||||| || || ||||| || | || |||| |
Sbjct 30952 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTCCTGCC 30893
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| || || || || | ||||||||||| | || | | ||||||
Sbjct 30892 GTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 30833
Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
|||| ||| || |||| | | | ||||||||||| ||||| || | |||||
Sbjct 30832 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 30773
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| |||||||| || ||||| || ||||| |||||
Sbjct 30772 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 30737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543201521544240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |