Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04] 1,661 sequences; 40,306,145 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1226 141 1e-27 seq364 134 2e-25 seq750 105 8e-17 seq1345 100 3e-15 seq825 98.7 1e-14 seq775 98.7 1e-14 seq879 95.1 1e-13 seq51 87.8 2e-11 >seq1226 Length=64016 Score = 141 bits (156), Expect = 1e-27 Identities = 186/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| || || || |||||||| || | |||||| || Sbjct 7861 CTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGA 7802 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||| || || | |||| ||| | ||| || | || || | || Sbjct 7801 GGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGACC 7742 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| ||| ||||||||| | || || ||||| ||||||||||| || || Sbjct 7741 GATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCTTC 7682 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| ||||||| || || || ||||| ||||| || | |||| ||||| Sbjct 7681 AATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCC 7622 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||||||||| ||||| || Sbjct 7621 GGCGTTGAAAAGCGTCGG 7604 Score = 98.7 bits (108), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 1628374 CCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCG 1628433 |||||||| || ||||| || |||| ||| || | | | ||||||||| Sbjct 8088 CCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTT 8029 Query 1628434 GTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCC 1628493 || | |||| ||| || || ||| |||| || ||| || ||||| || || Sbjct 8028 TTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCA 7969 Query 1628494 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGC 1628553 || |||||||||| ||||||||||| | |||||||| | |||| | || |||||| Sbjct 7968 CGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGC 7909 Query 1628554 CACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||||| |||||| ||||||||| || ||||||| ||| || Sbjct 7908 CACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 7862 >seq364 Length=11608 Score = 134 bits (148), Expect = 2e-25 Identities = 217/311 (70%), Gaps = 1/311 (0%) Strand=Plus/Minus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||| Sbjct 7619 GTACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCAT 7560 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| | |||| ||| ||| ||| || | | || || | Sbjct 7559 AAAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGACAAGAAGTCT 7500 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||| ||||||||||| |||||||| ||| ||| |||||||||||| | ||| || Sbjct 7499 GTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCA 7440 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCT 868938 |||| || ||| | | |||||||| ||| |||| ||| || ||||| | |||| | | Sbjct 7439 GGGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTT 7380 Query 868939 GGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCA 868998 || || |||| ||||| || | || | | || || |||||||||||| Sbjct 7379 CACAACCTCCTTGTTGGGCCTGTTGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGT 7320 Query 868999 GTGCA-ACCCT 869008 ||| | ||||| Sbjct 7319 GTGTAGACCCT 7309 Score = 95.1 bits (104), Expect = 1e-13 Identities = 117/158 (74%), Gaps = 9/158 (6%) Strand=Plus/Minus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || || ||||| ||||| |||||||||||||| ||||||| | ||| || ||| Sbjct 7276 AGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAG 7217 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 ||||| ||||||||| | || || |||| || ||| ||||||| || || || | Sbjct 7216 AAGATACCCTCGACGACAGCGAAAGCGATCAGGCGCGTGGCAAAG--GTTGA----CTTC 7163 Query 869336 TTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 |||| |||||||| ||| |||||||||||||| || Sbjct 7162 TTGTCGGTGATCCACCTCAGAGCCCAGTCGGCCTTCTT 7125 >seq750 Length=227801 Score = 105 bits (116), Expect = 8e-17 Identities = 266/402 (66%), Gaps = 8/402 (2%) Strand=Plus/Plus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCC 18146 || ||||||| ||||||||| ||| | || || | || ||||| |||| || || Sbjct 26288 GTAACCACCTATGGCGAGTCACACTGC-CGCTCGGTGGGATGCATTGTCGATGGATGCCC 26346 Query 18147 GCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGG 18206 ||| |||||| | || ||||||||||||||||||| || || | || | ||||| || Sbjct 26347 GCCAGGCATGCAATTGACCGAGGCCGACATCCAGCCACACATGAACAGGAGGCGACCTGG 26406 Query 18207 CCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCAC 18266 ||| || | | ||||| ||||| ||| || ||| |||||||||||||| Sbjct 26407 ACAGTCCGATATCACAACGCCCCGCAATGAGGAGGACAAGGTCGAGATCCAGTCGGGCAC 26466 Query 18267 GGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCG 18326 ||| |||| ||||| | ||| | || | ||| | || ||| |||||| | Sbjct 26467 CGAGTTCGGCATCACGTTGGGCACCCCGATTGGCATGCGCGTCATGAACAAGGACCAGAG 26526 Query 18327 GCC------CGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTA 18380 ||| | || | | ||| ||| || | | || || ||| ||||| || | Sbjct 26527 GCCAAAGGACTACGGCAACTCCACTATGGACAGGTTCCCCCGACCCAGCCACGCTGATTG 26586 Query 18381 CACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCG 18440 || ||| | | ||||||||| |||||||| ||||| ||| || ||||| Sbjct 26587 GACATACCTCGAGAAGTACGGCGTCAAGGCGAGCAGTGGCGGCGGCAGGAGCAGCGCCCG 26646 Query 18441 CGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 |||||| | || ||||| ||||| || |||||||||| Sbjct 26647 TGAGACCATTGGCCGAGTCGCAGCCGGTGCCATCGCCGAGAA 26688 Score = 89.7 bits (98), Expect = 6e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || || ||||| | ||| ||||||| |||||| Sbjct 26924 GACAGCATCGGAGGTACTGTTCACTGTGTCATCCGCAATGCGCCATCAGGCCTGGGCGAG 26983 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | |||||| ||| | || || |||||| || || ||||| Sbjct 26984 CCTTGCTTCGACAAGTTGGAGGCCAAGCTGGGGCATGCTATGCTGAGCATTCCTGCCACA 27043 Query 19167 AAGGGATTCGAGATTGG 19183 ||||| ||||||||||| Sbjct 27044 AAGGGTTTCGAGATTGG 27060 >seq1345 Length=106853 Score = 100 bits (110), Expect = 3e-15 Identities = 136/189 (72%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025 ||||| ||||||||| || ||| |||||||| || || || || | |||||||||| Sbjct 71842 GTCGATATCGGGGTCGTTGATCAGACCCTTCCAGCCCACCGTGGTCCTGGGCTTTTCGAG 71783 Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAG 1727085 ||||||||||| || | ||| || | || || || ||| | | | ||| || Sbjct 71782 GTAGGCGCGCATAACGATGCAGAGGTCATCTGAGAGCTTGTC---GGCCAGGGCCTTGAG 71726 Query 1727086 GCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAAC 1727145 |||| ||| || |||| | | || ||||||||||| |||||| || ||||||||||| Sbjct 71725 GCGTTGGCAGTATTCGAGGGCCGCTGCCGGGTCGTGAATCGAACAGGGTCCAACGATAAC 71666 Query 1727146 CAGCAGCCG 1727154 || || || Sbjct 71665 GAGAAGGCG 71657 >seq825 Length=239462 Score = 98.7 bits (108), Expect = 1e-14 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 ||||||||| || || ||||| || || || |||| ||||| | || || || ||||| Sbjct 145223 CAACTACCTTGATATTAAGCCGCTACTTGACGTTGGTTGCAAAACGGTTGCAAATATGAT 145164 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 |||||||||||| || |||||||| |||||||| || ||||||| Sbjct 145163 CAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACTTTCAACATCA 145120 >seq775 Length=370353 Score = 98.7 bits (108), Expect = 1e-14 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 1574058 CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCG 1574117 || ||||| || || || ||| || | || || |||||||||||| || | || || | Sbjct 299245 CTCCCGCCAGGCCGACATAAGCTGGTGATTCTTGACGAGGCCGACAGCATGACATCTGGC 299304 Query 1574118 GCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTG 1574177 || |||||||||||| || || ||||| | || ||||||| ||| | || || | Sbjct 299305 GCACAGCAGGCCCTGAGGCGAACTATGGAGATCTACTCCAACACTACGAGATTCGCTTTC 299364 Query 1574178 GCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGC 1574237 ||||||||| ||| | |||| ||| |||| || ||| |||||||| || || Sbjct 299365 GCGTGCAACCAGTCAAACAAAATCATAGAGCCCCTGCAGTCTCGATGCGCCATCCTCCGG 299424 Query 1574238 TTTGTGCGCCTGGGTGACGCCCAG 1574261 | | ||||||| ||||||||| Sbjct 299425 TACGCGCGCCTGACGGACGCCCAG 299448 >seq879 Length=209745 Score = 95.1 bits (104), Expect = 1e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 1726698 CGGCGCGCACGGCGTCGAGTGCCGTCGCCACGC-TCCCGTCGGTGCCGTTCTTGAAGCCG 1726756 |||||| | ||||||| || || |||| | | |||||||||||||||||||||||| Sbjct 130150 CGGCGCCGATAGCGTCGA-TGGCGACGCCCAGTGTGCCGTCGGTGCCGTTCTTGAAGCCG 130092 Query 1726757 ATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCG 1726816 | || | || || | || |||| ||||||||| | |||||||||||| ||||| || Sbjct 130091 ACGGGGAACGATAGGCCAGAGGCCAGCTCGCGGTGAAGCTGGCTCTCGGTGGTGCGGGCA 130032 Query 1726817 CCCACGGCGCC 1726827 || || ||||| Sbjct 130031 CCGACTGCGCC 130021 >seq51 Length=2088 Score = 87.8 bits (96), Expect = 2e-11 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 |||||||||||| |||||| | || || || | || ||||| | || || || ||||| Sbjct 966 CAACTACCTCGAGATCAAGGCACTACTAGAAGTCGGTTGCAAAACAGTCGCTAATATGAT 907 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTA 1592298 ||||||||||||||| | || || || ||||| || ||||||| ||| Sbjct 906 CAAGGGCAAGTCGCCGGGTGAAATTCGAAAGACGTTCAACATCACGTA 859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107002890561537