Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04]
1,661 sequences; 40,306,145 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq1226 277 2e-69
seq1505 109 6e-19
seq364 87.8 2e-12
>seq1226
Length=64016
Score = 277 bits (306), Expect = 2e-69
Identities = 530/774 (68%), Gaps = 18/774 (2%)
Strand=Plus/Plus
Query 53174 GAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACG 53233
|||| ||| ||| | | ||||||| || || | |||||| |||||| || |
Sbjct 7490 GAGAGGCCACAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAG 7549
Query 53234 CGTGTCCGTGAGACGTACGACTTAATG---AGCCAAAAGTACTTTACGCACGCCACGCCA 53290
|| ||| || || ||| || | ||| ||| || | ||| || |||||| | ||
Sbjct 7550 CGAGTCATCGAAACCTACAACCTTATGTCTAGCAAA---TTCTTCACACACGCCTCCCCG 7606
Query 53291 ACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATG 53350
|| || |||||||| || || || ||||| ||||| ||||||||||| | |||
Sbjct 7607 ACGCTTTTCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATG 7666
Query 53351 AAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAG 53410
||||| ||| || || || |||||||| || |||||| |||||| |||||||||
Sbjct 7667 AAGGACGACAGCATTGAAGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAG 7726
Query 53411 TGGTCGGGTGGTATCGGTATCCACTGC--TCGAACGTCCGTGCGAACGGCACACCAATCA 53468
| | || ||||||||| || || | ||| | ||||||| | ||| | |||
Sbjct 7727 ATGGCTGGCGGTATCGGTCTCAACGTCCATCGCA--TCCGTGCCACTGGCTCCTATATCG 7784
Query 53469 AGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGG 53528
|| || |||||| | | | || || || || ||||| || || ||||||||||| |
Sbjct 7785 CCGGTACCAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAG 7844
Query 53529 CCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGC 53588
| || |||||| |||||||||| |||||| || | || ||||||||||| ||||
Sbjct 7845 CTCGCTACGTCGACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGC 7904
Query 53589 CGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGA 53648
|||||||||| || | | ||||| ||||| || | ||| || || | || ||||
Sbjct 7905 CGTGGCACGCAGATGTCTTCGAGTTCCTCGACCTAAGGAAGAACCACGGAAAGGAGGAGA 7964
Query 53649 TGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGG 53708
| || |||||||||||| ||||| ||||| || || || |||||| | || |
Sbjct 7965 TTCGTGCCCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTGTTCATGAAGCGCGTTG 8024
Query 53709 AGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCT 53768
|||| ||| || ||| | |||||||||||||||||||||| |||||| || ||
Sbjct 8025 AGAAAAACGGCGACTGGACCTTGATGTGCCCGAACGAGTGCCCTGGCCTCGCGGACTGCT 8084
Query 53769 ACGGTGAGGAGTTTAACGAGATGTATCGGACGTACGCAGTTCAGGGCCGCTACAAG---- 53824
||||||| ||||| | | ||||| || ||| | || || ||||| || |
Sbjct 8085 ACGGTGAAGAGTTCGAGGCTCTGTATGAGAAGTATG-AG--CA-GGCCGGTAAGGGTCGC 8140
Query 53825 AAGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGA 53884
|||| | ||||||| | | | ||| | | ||||| || ||| ||||| ||
Sbjct 8141 AAGACGATCAAGGCCCAGAAACTTTGGTACTCCATCCTGGAGGCTCAGACTGAGACTGGT 8200
Query 53885 ACGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
| |||| |||| ||||||||| |||| ||||||||||||||||||
Sbjct 8201 AACCCGTTCATGCTGTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAAC 8254
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
||||| |||||||| | ||| |||||||||||||| || |||||| |||| | ||
Sbjct 9086 GCTGACCGTGGTGCCTTCATTGACCAGTCCCAGTCGCTCAACATCCACATGCGCGACCCG 9145
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
| ||| |||| | | ||||||||| || ||| |||||| || |||||||| |||
Sbjct 9146 ACCATGGGCAAGATCACCTCGATGCATTTCACCGGCTGGAAGCTTGGTCTCAAGACCGGT 9205
Query 55907 ATGTACTATCTGCGGAC 55923
|||||||| ||||||||
Sbjct 9206 ATGTACTACCTGCGGAC 9222
>seq1505
Length=46650
Score = 109 bits (120), Expect = 6e-19
Identities = 296/452 (65%), Gaps = 6/452 (1%)
Strand=Plus/Plus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| |||||||| || || || ||||||||||||| ||| || | || ||| ||||||| |
Sbjct 27252 CCAGTACCGATACCGTCGGCGCCGTTGACCAGAACCATGGGAATAACAGGCGCGTAAACC 27311
Query 151936 TCCGGCTCCA---CCTGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCC 151992
| || || | ||| | || ||||| | | || | || ||||| | |||
Sbjct 27312 TTGGGTTCGATGGCCTTT---CCATCATCGACCTGGTGCTGCAGAACGGGCTCATCAAGG 27368
Query 151993 GGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGGCC 152052
|| | || | || || | | ||| | || ||| || || || | |||||||
Sbjct 27369 GGGTTAAACACACGGCGCGCAAAAGGGGAGAGGCGAGTGTGAATATAACGAGCGCTGGCC 27428
Query 152053 GCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGG 152112
||||| | |||||| || || | ||||| | ||||| || || || ||||| |
Sbjct 27429 GCATCGCTACCACCTTGAAGTCGAGAACCAAAGTTGCCAGAAGGTTCCAGACAGTTGACG 27488
Query 152113 TTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTTCA 152172
|| |||| ||| || | || || || | | | || || ||||||| || |||
Sbjct 27489 TTATTGGAGCCTACATAGTTTTGCGCTAGACCTATGATTGTCTGCTGCAGAGAAGCCTCA 27548
Query 152173 CCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGTCC 152232
|||||||| || || | || ||| | || |||||| |||| | | |||||| | |||
Sbjct 27549 CCGTGGTGGTAAGCAGCCTTCTCTGAGACGTATCCAGCCAGTTCGACGACCTTCTTATCC 27608
Query 152233 GTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAACCG 152292
| |||||| | || | |||||| | || ||||| ||||| ||||| | ||
Sbjct 27609 TTGACCAGGTTTTGTTTAAAGCAGGCGAAGATGACCTTCCGCTGTCCAGGTTTTAGTCCA 27668
Query 152293 TCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
|| | || | || || |||||| || ||||
Sbjct 27669 TCAATCATGGACGGGATTGAACGCATGTTGTC 27700
Score = 86.0 bits (94), Expect = 7e-12
Identities = 90/117 (77%), Gaps = 6/117 (5%)
Strand=Plus/Plus
Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCT---G 119130
|||||| | ||||| ||||| || || |||||||| ||||| || |||| || |
Sbjct 29309 ACTGAAAATGTTGGTGAGCTTTGCGCCATATCCGTTACGACCTCC---CACGGTCTTGAG 29365
Query 119131 CTCCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||| ||||| ||||||||| | |||| ||||| || ||||||||||| |||||
Sbjct 29366 CTCCTTGTCGTCGTAGTTGGAACCCGTCAGGAGGTGACCGAAGATGAGCTCCGGGAT 29422
>seq364
Length=11608
Score = 87.8 bits (96), Expect = 2e-12
Identities = 178/262 (68%), Gaps = 7/262 (3%)
Strand=Plus/Minus
Query 75009 TCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAAC 75068
||||||| | | |||| |||| || ||||| ||||| || ||||| ||| | |
Sbjct 7001 TCCTTGATGTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATG 6942
Query 75069 GACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATC--CTTTGAAAAATTCA 75126
|||| | ||||||| | || ||||| | |||||| || || | |||| |||
Sbjct 6941 ATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATCTGGACTTCGGCGCTGAATCGCTCA 6882
Query 75127 TGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGA 75186
||| ||||| |||||||||| || || |||||||| || || || | | ||
Sbjct 6881 A--CGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCGAAGAATGCAAGGATGTGTGAGA 6824
Query 75187 TAAAGTGGCGCTCATCGTCAGTGAGTTTGTC---CCAATCCTTCAGGTCCCCCGCCAAAT 75243
| |||| ||||| || ||||| |||| ||| || | || ||| | |||||
Sbjct 6823 TGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAAAT 6764
Query 75244 CAATCTCCTCGACCGTCCAGAA 75265
||||||| ||| ||||||||||
Sbjct 6763 CAATCTCTTCGGCCGTCCAGAA 6742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547204638427800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |