Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548775.1_202016-02-04] 1,661 sequences; 40,306,145 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1226 163 4e-35 seq364 87.8 2e-12 >seq1226 Length=64016 Score = 163 bits (180), Expect = 4e-35 Identities = 445/680 (65%), Gaps = 16/680 (2%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 |||||||| || || ||||||||||| | |||||| || | || || ||| || ||||| Sbjct 8070 CCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATG 8011 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 || |||||||| ||||| ||||| | || || || |||| | | || || ||||| Sbjct 8010 AACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCG 7951 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| | || ||||| ||||| | | ||| | ||||| || || || || || Sbjct 7950 TGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 7891 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || ||||| || | || | || ||||| || | Sbjct 7890 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAAC 7831 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | || ||| |||| ||| ||||| || || || || || || | ||||| ||| Sbjct 7830 ACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCA 7771 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | || || || | | | | || || || || |||||||| || || | || Sbjct 7770 GTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCA 7711 Query 78315 CAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAA 78374 ||| || | || |||||||| || || || ||||| ||| |||| | || || || Sbjct 7710 CAAGTCTTGAGGGTGTCGTAGATTCCTTCAATGCTGTCGTCCTTCATATCAACCAGGAAG 7651 Query 78375 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTA 78434 || |||| ||| || || || || || || | ||||| || || || || Sbjct 7650 CATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTG 7591 Query 78435 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGT------CCCAT 78488 || |||| ||| | || ||||| ||||| || || || |||| |||| Sbjct 7590 AAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA- 7532 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 || ||||| || |||||||| | ||| ||||| || || || || |||| | Sbjct 7531 -----GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCA 7477 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAA 78606 || | ||||| | ||| || | || | ||| || || || ||||| | ||| ||||| Sbjct 7476 TTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAA 7417 Query 78607 AGTCTCTCTCGTAAATAATA 78626 || | ||||| | |||| Sbjct 7416 --TCACGGTCGTAGACAATA 7399 >seq364 Length=11608 Score = 87.8 bits (96), Expect = 2e-12 Identities = 172/254 (68%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 48438 TCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATC 48497 ||||||||||| || || || ||||| || ||||| || || | || || | ||| Sbjct 6965 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATC 6906 Query 48498 TGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCA 48557 || || || | | ||||| ||| | | ||||| || || || |||||| ||| || Sbjct 6905 TGGACTTCGGCGCTGAATCGCTCAACGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCG 6846 Query 48558 AAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAG---TTTATTCCAG 48614 || ||||| | | ||| || || || ||||| | || || || |||||| Sbjct 6845 AAGAATGCAAGGATGTGTGAGATGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAG 6786 Query 48615 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTT 48674 || | || ||| || || | ||| | ||||| || ||||| ||||| ||||| || || Sbjct 6785 TCGTGGAGATCCTTGGACAAATCAATCTCTTCGGCCGTCCAGAATGAGGCCTCGGCCTTC 6726 Query 48675 TTATACATATTCCA 48688 || ||||| | ||| Sbjct 6725 TTGTACATCTGCCA 6712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694654376939040