Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq288 91.5 1e-13 >seq288 Length=58383 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || | || ||||||||||| || |||| ||| | || Sbjct 38546 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 38487 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | | || ||| ||| || || || ||| | || || ||| Sbjct 38486 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 38427 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | |||||||||||||| || ||||| ||| ||| || | ||||||||| Sbjct 38426 CAACGCTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAAT 38367 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTG 29171 ||||||||||| || ||||| ||| | ||| Sbjct 38366 ATTCAGAAGGAGTCGACTCTGCACCTTGTG 38337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428328973415630