Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq288 118 9e-22 seq902 87.8 2e-12 >seq288 Length=58383 Score = 118 bits (130), Expect = 9e-22 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| ||| |||||||| ||||||| || || || Sbjct 38546 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 38487 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| ||||| |||| || |||| | ||| ||||| || || || || ||||| Sbjct 38486 GACACAATCGACAACGTCA---AATCAAAGATTCAA-GACAAGGAGGGTATCCCGCCTGA 38431 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 |||||| || | || ||||| ||||| || | || |||| || || || ||||| Sbjct 38430 CCAACAACGCTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTA 38371 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||||||| || || || || || || | ||||| Sbjct 38370 CAATATTCAGAAGGAGTCGACTCTGCACCTTGTGCT 38335 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || ||||||| | || || ||||| || Sbjct 38774 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 38715 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || || || ||| || || || || ||||| || |||| Sbjct 38714 GACACGATTGA--CAATGTTAAATCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACC 38657 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || || || || || || || |||| ||||| || ||| |||| Sbjct 38656 AACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACA 38597 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || ||||| ||||| || || || || || || Sbjct 38596 ACATCCAAAAGGAATCTACTCTGCACTTGGTCCT 38563 >seq902 Length=131178 Score = 87.8 bits (96), Expect = 2e-12 Identities = 129/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || |||||| |||| || || ||||||| | || || ||||| || ||||| ||| Sbjct 112557 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 112616 Query 25068 GAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126 || ||||| | || | ||| ||||| || || ||||| |||||||||||||| | Sbjct 112617 GACAATGTGAAGTCCAAGATTCAG-GACAAGGAGGGAATTCCCCCTGACCAACAGCGTCT 112675 Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 ||| ||||| ||||| || | || || | || ||| | ||| ||||| || || || Sbjct 112676 TATCTTTGCTGGCAAGCAGCTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 112735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433320891524990