Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq288 116 3e-21 >seq288 Length=58383 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTC 45190 ||| || ||||| || || ||||| || ||||| ||||| | |||| ||| || Sbjct 38337 CACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTC 38396 Query 45191 CAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTG 45250 || || || || || | ||||| ||||| ||||| ||||| || || || || ||||| Sbjct 38397 CAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTG 38456 Query 45251 AATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 ||| ||| ||||| || | || | ||||| ||||| || |||||||| || | |||| Sbjct 38457 AATCTTTGATTTGA-CGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTT 38515 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| || || || || || |||||||| Sbjct 38516 TGCCGGTAAGCGTCTTGACGAAGATTTGCAT 38546 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195 ||||| || |||||||||||||| || || ||| ||| | | | ||| ||||| | Sbjct 38572 TGCAGAGTAGATTCCTTTTGGATGTTGTAGTCG--GACAGCGTGCGTCCATCCTCCAACT 38629 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 | ||||| ||| | |||| ||| || |||||||| ||||| || || |||||||| || | Sbjct 38630 GCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTATCTTGGATCT 38689 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | ||| | || | ||||| ||||||||||| || | || | || ||||| | Sbjct 38690 TGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTGCCCG 38749 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | | ||| || || || || ||||| Sbjct 38750 TCAAAGTCTTGACGAAGATCTGCAT 38774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451995595046160