Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq757 156 5e-33 seq288 123 3e-23 seq902 98.7 1e-15 >seq757 Length=145172 Score = 156 bits (172), Expect = 5e-33 Identities = 164/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| || || | || |||||||| ||||| ||||||||||| || || | | Sbjct 70826 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCC 70767 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| || |||||||||||||| || ||||||||||||||||| | || | | |||||| Sbjct 70766 GTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 70707 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| | | | ||||||||||| ||||| || | ||||| Sbjct 70706 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 70647 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||||||| || || || || ||||| ||||| Sbjct 70646 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 70611 >seq288 Length=58383 Score = 123 bits (136), Expect = 3e-23 Identities = 141/187 (75%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| || || | ||||||||||| ||||| ||||||||||| || || || |||| || Sbjct 39021 CACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTC 39080 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 ||| ||||||||||| || || | ||||| ||||| | || | | |||||||||| Sbjct 39081 GAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTG 39140 Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562 ||||||| ||||| ||| | | | || ||||| || ||||| || | |||||||| | Sbjct 39141 GATCTTCGACTTGA-CGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCT 39199 Query 46563 TGCCCGT 46569 |||| || Sbjct 39200 TGCCAGT 39206 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| | ||| || |||| || |||||| || |||||||| || || || || || | Sbjct 38331 ACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCC 38390 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||| || || |||||||| || ||||| | ||| | | |||||| Sbjct 38391 ATCCTCCAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTT 38450 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 ||| ||||| |||| ||| | | | ||||| ||||| || || | |||| Sbjct 38451 GTCTTGAATCTTTGATTTGA-CGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGA 38509 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||||| || ||||| || || ||||||||||| Sbjct 38510 TGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 38546 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| |||| |||| ||| ||||||||||| ||||||||||| || ||||| | Sbjct 38559 ACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCC 38618 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || | |||||| || ||||| |||| ||||| ||||| | || | | |||||| Sbjct 38619 ATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTT 38678 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 || |||||| || | | | | |||||| || || || |||| |||||| Sbjct 38679 ATCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGAT 38738 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| |||||||||| || || || ||||| ||||| Sbjct 38739 GGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 38774 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||| | || |||||||||||||| ||||||||||| || || || |||| || Sbjct 38794 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 38853 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| || ||||| || | ||| || ||||| | || | | |||||||||| | Sbjct 38854 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 38913 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 |||||| ||| | | | | || ||| || || || |||| || || || ||| Sbjct 38914 ATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTG 38973 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || ||||| || || || ||||| Sbjct 38974 CCAGTGAGGGTTTTGACGAAAATCTGCAT 39002 >seq902 Length=131178 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||||| ||||| || |||| || ||||||||||| || || | Sbjct 112737 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 112678 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 | | ||||| ||||| | || | | |||||||||| ||||| ||| | | Sbjct 112677 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 112618 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| || || || |||| |||||||| ||||| ||||| || || || | Sbjct 112617 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 112558 Query 46584 AG 46585 || Sbjct 112557 AG 112556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565228889863920