Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04]
1,346 sequences; 41,601,338 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq757 156 5e-33
seq288 123 3e-23
seq902 98.7 1e-15
>seq757
Length=145172
Score = 156 bits (172), Expect = 5e-33
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| ||| || || | || |||||||| ||||| ||||||||||| || || | |
Sbjct 70826 ACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCC 70767
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || |||||||||||||| || ||||||||||||||||| | || | | ||||||
Sbjct 70766 GTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTT 70707
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| | | | ||||||||||| ||||| || | |||||
Sbjct 70706 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 70647
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| |||||||| || || || || ||||| |||||
Sbjct 70646 AGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 70611
>seq288
Length=58383
Score = 123 bits (136), Expect = 3e-23
Identities = 141/187 (75%), Gaps = 2/187 (1%)
Strand=Plus/Plus
Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443
||| || || | ||||||||||| ||||| ||||||||||| || || || |||| ||
Sbjct 39021 CACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTC 39080
Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503
||| ||||||||||| || || | ||||| ||||| | || | | ||||||||||
Sbjct 39081 GAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTG 39140
Query 46504 GATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTT 46562
||||||| ||||| ||| | | | || ||||| || ||||| || | |||||||| |
Sbjct 39141 GATCTTCGACTTGA-CGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCT 39199
Query 46563 TGCCCGT 46569
|||| ||
Sbjct 39200 TGCCAGT 39206
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||| || |||| || |||||| || |||||||| || || || || || |
Sbjct 38331 ACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCC 38390
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || ||||||||||| || || |||||||| || ||||| | ||| | | ||||||
Sbjct 38391 ATCCTCCAGCTGCTTGCCCGCAAAGATCAAGCGTTGTTGGTCAGGCGGGATACCCTCCTT 38450
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556
||| ||||| |||| ||| | | | ||||| ||||| || || | ||||
Sbjct 38451 GTCTTGAATCTTTGATTTGA-CGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGA 38509
Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||||||| || ||||| || || |||||||||||
Sbjct 38510 TGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 38546
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| |||| |||| ||| ||||||||||| ||||||||||| || ||||| |
Sbjct 38559 ACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCC 38618
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || | |||||| || ||||| |||| ||||| ||||| | || | | ||||||
Sbjct 38619 ATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTT 38678
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|| |||||| || | | | | |||||| || || || |||| ||||||
Sbjct 38679 ATCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGAT 38738
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| |||||||||| || || || ||||| |||||
Sbjct 38739 GGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 38774
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| ||| | || |||||||||||||| ||||||||||| || || || |||| ||
Sbjct 38794 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 38853
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| || ||||| || | ||| || ||||| | || | | |||||||||| |
Sbjct 38854 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 38913
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||| | | | | || ||| || || || |||| || || || |||
Sbjct 38914 ATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTG 38973
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || ||||| || || || |||||
Sbjct 38974 CCAGTGAGGGTTTTGACGAAAATCTGCAT 39002
>seq902
Length=131178
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| ||||| || |||| || ||||||||||| || || |
Sbjct 112737 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 112678
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
| | ||||| ||||| | || | | |||||||||| ||||| ||| | |
Sbjct 112677 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 112618
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | |||||| || || || |||| |||||||| ||||| ||||| || || || |
Sbjct 112617 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 112558
Query 46584 AG 46585
||
Sbjct 112557 AG 112556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565228889863920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |