Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq535 370 2e-97 seq464 150 3e-31 >seq535 Length=134152 Score = 370 bits (410), Expect = 2e-97 Identities = 1143/1739 (66%), Gaps = 73/1739 (4%) Strand=Plus/Minus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| || ||||| |||||| ||||| | | | |||||||||||| | | || Sbjct 103310 GTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAACGACGGT 103251 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | || |||| |||||| || |||||| ||| | ||| ||||| |||| || || Sbjct 103250 ACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGGATGCTGGC 103191 Query 212816 GATGTTCTGCACAGACCC--CCTGTGT-ATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 |||||||| | || || ||| | ||| | | | | |||||| || ||| Sbjct 103190 AATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTT---CATGTCGTCTGACCA 103134 Query 212873 GAGGCCCCTGGTCT-CCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTG 212931 || || | || |||| ||||| || |||||||||| |||||| || || | Sbjct 103133 CAGACCAA-GCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTACCTGGAACTCGCCGG 103075 Query 212932 AGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCA 212991 ||||| | | ||||||| ||| ||||| |||||||| | || ||||||||| || | Sbjct 103074 CAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTCGTTGTTGCCAA 103015 Query 212992 GAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGT 213051 | || || | ||||| ||||| |||||||| || || || | ||||| | || || | Sbjct 103014 GGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTTGCGGACACCAT 102955 Query 213052 GCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCT 213111 | | |||| | | || | |||||||||| ||||| | || Sbjct 102954 GTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAG---------AGGTCTGAGGGCT 102904 Query 213112 TCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGG 213171 | ||||||||||||||| |||| | ||||| | || || |||| ||| | | Sbjct 102903 TGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACAGGAGATCCCTCGTATGTCG 102844 Query 213172 AGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGG 213231 |||| || || ||||||| ||||||| ||| || || ||| ||||||| |||||||| Sbjct 102843 AGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTAGATGG 102784 Query 213232 TTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCA-TG 213290 | ||||| |||| | ||||||| | ||||| || ||| ||| |||| | || Sbjct 102783 TCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAAGGCAGACGGAGTG 102724 Query 213291 CGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTA 213350 | |||| | |||||||| || ||||| || | ||||| || ||||| | || ||| Sbjct 102723 CAA-GGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTGTGGCGCATGTTG 102665 Query 213351 GACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCG 213409 ||| | || ||||| | |||||| ||||| ||||||||||||||||||||||| Sbjct 102664 CTGTTGCGTGC-CTCCTGGACGGGGTAGTAGTTGACTTCGATGATCTTGTTGAGGTTGCG 102606 Query 213410 GGTGGCCACTTTGGTGAC---ATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTC 213466 | |||| ||||| |||| || | ||| || |||| | || | Sbjct 102605 AACAACGACTTGAGTGACCTCATGG---AGTTTCTCA------AAGTCGTATTCACCCTT 102555 Query 213467 CTGC------ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTG 213520 || || |||| ||||| || | | || |||||||| || || ||||| | Sbjct 102554 GTGGTAGTCGACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATACAGCAACCTCGTC 102495 Query 213521 AGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTT 213580 || | | | |||||| || ||||| ||||| |||||| || || ||||| || ||||| Sbjct 102494 AGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAATGGTACCAAGGTT 102435 Query 213581 CTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAGAGCATGTAGGGGGACCCGGTCT 213639 || ||||| ||| ||| | |||| ||||||||| |||||| | ||| || |||| Sbjct 102434 CTTCTGGTTGCTCTT-GCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCT 102376 Query 213640 CTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAG 213699 | ||| | | |||| || | ||| || | | |||||||| | | | ||| Sbjct 102375 CAGTCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTGGGCCTTGATCGTCTTGC-GACCC 102317 Query 213700 CTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGT 213759 | | ||| | ||| |||| || || || | | ||| || | || || | || Sbjct 102316 TTACCGGCCTG--CTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAG---CAGT 102262 Query 213760 CC---AGTCCCGGACAGGA-TGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGA-C 213814 || || || || || | |||| ||||| | | ||||||| |||| | ||| | | Sbjct 102261 CCGCGAGGCCAGGGCACTCGTTCGGG-CACATCAAGGTCCAGTCGCCGTTTT-TCTCAAC 102204 Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874 | || ||||||||| || |||| ||| || ||| ||||||||| | || | |||| Sbjct 102203 GCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTC 102144 Query 213875 GTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTC 213934 ||| ||| ||| || | || || || || || |||| || |||||||||||||| Sbjct 102143 CTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTC 102084 Query 213935 CATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCAC 213991 | ||||||||||||||| || | || | ||||| |||||||| || | || Sbjct 102083 AAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGT 102024 Query 213992 CATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTAT 214051 ||||||| | ||||| | ||| || | ||||| || |||||||| || || || Sbjct 102023 GTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGAT 101964 Query 214052 ATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACCGGCGTACT 214107 ||| ||||| | ||| | || ||| ||||| ||| || || || || || || Sbjct 101963 ATAGGAGCCAGTGGCAC---GGATGC-GATGGACGTTGAGACCGATACCGCCAGCCATCT 101908 Query 214108 TGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGA 214167 ||||||||||||| || | | | || || ||| || | |||||||| || | | Sbjct 101907 TGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCA 101848 Query 214168 GGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGAAAAGCGTG 214226 | | || |||||| ||| | || | ||||| | | ||| | |||||||||||| Sbjct 101847 TATCAACCAGGAAGCATGACGACAACT-GAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTC 101789 Query 214227 GGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGACTGAGGGG 214286 ||| ||| || | | || ||| |||| | || ||||||| || | |||| Sbjct 101788 GGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCA 101729 Query 214287 ATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCCTCT---CT 214343 |||| || ||| || ||| | ||| | ||||||||| ||||||| | Sbjct 101728 ATGTTGTCACCCCAGATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACA 101669 Query 214344 ATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 || || ||| | ||| | ||||| || | ||| ||||||||||| || || || Sbjct 101668 ATCTTGCCATTGAG---CTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATA 101613 >seq464 Length=116129 Score = 150 bits (166), Expect = 3e-31 Identities = 345/518 (67%), Gaps = 15/518 (3%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 1183 TGGTACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCC 1242 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTCC 47953 || || ||| ||||||| | || ||| ||| || ||| | | | Sbjct 1243 ATAAAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGA------CA 1296 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || || || ||||| |||| ||||| | ||| ||| || ||||||||| | | Sbjct 1297 AGAAGTCTGTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGG 1356 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 |||| |||||| |||| || |||||||| | ||| |||| || || || | ||| Sbjct 1357 AGGGCGCAGGGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGACAACA 1416 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 |||| ||| || || ||| ||||| |||| || | | || | ||| Sbjct 1417 ATCTCCTTCACAACCTCCTTGTTGGGCCTGTTGTTCAGGAGCGAGA---ACAGGAGACAG 1473 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||| | || || || || ||||||| |||||||||| |||||| Sbjct 1474 GCAAAGTCGGTGTGTAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTCAGACCA 1533 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || ||||||||||| || | || |||| || ||||||||| Sbjct 1534 GGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGATA 1593 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || | ||||| ||| | || | | | || | | |||||||| | |||| Sbjct 1594 CCCTCGACGACAGCGAAAGCGATCAGGCGCGTGGCAAAGGTTGACTTCTTGTCGGTGATC 1653 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || || |||||||| |||||||| |||||| || Sbjct 1654 CACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 1691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931517126960640