Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq535 145 9e-29 seq464 134 2e-25 seq425 105 8e-17 seq714 100 3e-15 seq177 98.7 1e-14 seq111 98.7 1e-14 seq547 95.1 1e-13 >seq535 Length=134152 Score = 145 bits (160), Expect = 9e-29 Identities = 187/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| || || || |||||||| || | |||||| || Sbjct 102044 CTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGA 101985 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||| || || | |||| ||| | ||| || | || || | || Sbjct 101984 GGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGACC 101925 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| ||| ||||||||| | || || ||||| ||||||||||| ||||| Sbjct 101924 GATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTC 101865 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| ||||||| || || || ||||| ||||| || | |||| ||||| Sbjct 101864 AATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCC 101805 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||||||||| ||||| || Sbjct 101804 GGCGTTGAAAAGCGTCGG 101787 Score = 98.7 bits (108), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 1628374 CCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCG 1628433 |||||||| || ||||| || |||| ||| || | | | ||||||||| Sbjct 102271 CCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTT 102212 Query 1628434 GTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCC 1628493 || | |||| ||| || || ||| |||| || ||| || ||||| || || Sbjct 102211 TTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCA 102152 Query 1628494 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGC 1628553 || |||||||||| ||||||||||| | |||||||| | |||| | || |||||| Sbjct 102151 CGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGC 102092 Query 1628554 CACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||||| |||||| ||||||||| || ||||||| ||| || Sbjct 102091 CACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 102045 >seq464 Length=116129 Score = 134 bits (148), Expect = 2e-25 Identities = 217/311 (70%), Gaps = 1/311 (0%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||| Sbjct 1185 GTACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCAT 1244 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| | |||| ||| ||| ||| || | | || || | Sbjct 1245 AAAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGACAAGAAGTCT 1304 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||| ||||||||||| |||||||| ||| ||| |||||||||||| | ||| || Sbjct 1305 GTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCA 1364 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCT 868938 |||| || ||| | | |||||||| ||| |||| ||| || ||||| | |||| | | Sbjct 1365 GGGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTT 1424 Query 868939 GGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCA 868998 || || |||| ||||| || | || | | || || |||||||||||| Sbjct 1425 CACAACCTCCTTGTTGGGCCTGTTGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGT 1484 Query 868999 GTGCA-ACCCT 869008 ||| | ||||| Sbjct 1485 GTGTAGACCCT 1495 Score = 95.1 bits (104), Expect = 1e-13 Identities = 117/158 (74%), Gaps = 9/158 (6%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || || ||||| ||||| |||||||||||||| ||||||| | ||| || ||| Sbjct 1528 AGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAG 1587 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 ||||| ||||||||| | || || |||| || ||| ||||||| || || || | Sbjct 1588 AAGATACCCTCGACGACAGCGAAAGCGATCAGGCGCGTGGCAAAG--GTTGA----CTTC 1641 Query 869336 TTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 |||| |||||||| ||| |||||||||||||| || Sbjct 1642 TTGTCGGTGATCCACCTCAGAGCCCAGTCGGCCTTCTT 1679 >seq425 Length=207173 Score = 105 bits (116), Expect = 8e-17 Identities = 266/402 (66%), Gaps = 8/402 (2%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCC 18146 || ||||||| ||||||||| ||| | || || | || ||||| |||| || || Sbjct 40620 GTAACCACCTATGGCGAGTCACACTGC-CGCTCGGTGGGATGCATTGTCGATGGATGCCC 40562 Query 18147 GCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGG 18206 ||| |||||| | || ||||||||||||||||||| || || | || | ||||| || Sbjct 40561 GCCAGGCATGCAATTGACCGAGGCCGACATCCAGCCACACATGAACAGGAGGCGACCTGG 40502 Query 18207 CCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCAC 18266 ||| || | | ||||| ||||| ||| || ||| |||||||||||||| Sbjct 40501 ACAGTCCGATATCACAACGCCCCGCAATGAGGAGGACAAGGTCGAGATCCAGTCGGGCAC 40442 Query 18267 GGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCG 18326 ||| |||| ||||| | ||| | || | ||| | || ||| |||||| | Sbjct 40441 CGAGTTCGGCATCACGTTGGGCACCCCGATTGGCATGCGCGTCATGAACAAGGACCAGAG 40382 Query 18327 GCC------CGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTA 18380 ||| | || | | ||| ||| || | | || || ||| ||||| || | Sbjct 40381 GCCAAAGGACTACGGCAACTCCACTATGGACAGGTTCCCCCGACCCAGCCACGCTGATTG 40322 Query 18381 CACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCG 18440 || ||| | | ||||||||| |||||||| ||||| ||| || ||||| Sbjct 40321 GACATACCTCGAGAAGTACGGCGTCAAGGCGAGCAGTGGCGGCGGCAGGAGCAGCGCCCG 40262 Query 18441 CGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 |||||| | || ||||| ||||| || |||||||||| Sbjct 40261 TGAGACCATTGGCCGAGTCGCAGCCGGTGCCATCGCCGAGAA 40220 Score = 89.7 bits (98), Expect = 6e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || || ||||| | ||| ||||||| |||||| Sbjct 39984 GACAGCATCGGAGGTACTGTTCACTGTGTCATCCGCAATGCGCCATCAGGCCTGGGCGAG 39925 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | |||||| ||| | || || |||||| || || ||||| Sbjct 39924 CCTTGCTTCGACAAGTTGGAGGCCAAGCTGGGGCATGCTATGCTGAGCATTCCTGCCACA 39865 Query 19167 AAGGGATTCGAGATTGG 19183 ||||| ||||||||||| Sbjct 39864 AAGGGTTTCGAGATTGG 39848 >seq714 Length=34370 Score = 100 bits (110), Expect = 3e-15 Identities = 136/189 (72%), Gaps = 3/189 (2%) Strand=Plus/Plus Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025 ||||| ||||||||| || ||| |||||||| || || || || | |||||||||| Sbjct 21568 GTCGATATCGGGGTCGTTGATCAGACCCTTCCAGCCCACCGTGGTCCTGGGCTTTTCGAG 21627 Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAG 1727085 ||||||||||| || | ||| || | || || || ||| | | | ||| || Sbjct 21628 GTAGGCGCGCATAACGATGCAGAGGTCATCTGAGAGCTTGTC---GGCCAGGGCCTTGAG 21684 Query 1727086 GCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAAC 1727145 |||| ||| || |||| | | || ||||||||||| |||||| || ||||||||||| Sbjct 21685 GCGTTGGCAGTATTCGAGGGCCGCTGCCGGGTCGTGAATCGAACAGGGTCCAACGATAAC 21744 Query 1727146 CAGCAGCCG 1727154 || || || Sbjct 21745 GAGAAGGCG 21753 >seq177 Length=448303 Score = 98.7 bits (108), Expect = 1e-14 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 ||||||||| || || ||||| || || || |||| ||||| | || || || ||||| Sbjct 411334 CAACTACCTTGATATTAAGCCGCTACTTGACGTTGGTTGCAAAACGGTTGCAAATATGAT 411275 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 |||||||||||| || |||||||| |||||||| || ||||||| Sbjct 411274 CAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACTTTCAACATCA 411231 >seq111 Length=450714 Score = 98.7 bits (108), Expect = 1e-14 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 1574058 CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCG 1574117 || ||||| || || || ||| || | || || |||||||||||| || | || || | Sbjct 361769 CTCCCGCCAGGCCGACATAAGCTGGTGATTCTTGACGAGGCCGACAGCATGACATCTGGC 361828 Query 1574118 GCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTG 1574177 || |||||||||||| || || ||||| | || ||||||| ||| | || || | Sbjct 361829 GCACAGCAGGCCCTGAGGCGAACTATGGAGATCTACTCCAACACTACGAGATTCGCTTTC 361888 Query 1574178 GCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGC 1574237 ||||||||| ||| | |||| ||| |||| || ||| |||||||| || || Sbjct 361889 GCGTGCAACCAGTCAAACAAAATCATAGAGCCCCTGCAGTCTCGATGCGCCATCCTCCGG 361948 Query 1574238 TTTGTGCGCCTGGGTGACGCCCAG 1574261 | | ||||||| ||||||||| Sbjct 361949 TACGCGCGCCTGACGGACGCCCAG 361972 >seq547 Length=293497 Score = 95.1 bits (104), Expect = 1e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 1726698 CGGCGCGCACGGCGTCGAGTGCCGTCGCCACGC-TCCCGTCGGTGCCGTTCTTGAAGCCG 1726756 |||||| | ||||||| || || |||| | | |||||||||||||||||||||||| Sbjct 157843 CGGCGCCGATAGCGTCGA-TGGCGACGCCCAGTGTGCCGTCGGTGCCGTTCTTGAAGCCG 157901 Query 1726757 ATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCG 1726816 | || | || || | || |||| ||||||||| | |||||||||||| ||||| || Sbjct 157902 ACGGGGAACGATAGGCCAGAGGCCAGCTCGCGGTGAAGCTGGCTCTCGGTGGTGCGGGCA 157961 Query 1726817 CCCACGGCGCC 1726827 || || ||||| Sbjct 157962 CCGACTGCGCC 157972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107028740936682