Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq288 154 1e-32 seq535 149 6e-31 seq757 104 2e-17 >seq288 Length=58383 Score = 154 bits (170), Expect = 1e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| ||||| ||||| || || |||||||| ||| | | Sbjct 38546 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 38487 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| |||||| |||||||| || || || || || || ||| Sbjct 38486 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 38427 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| ||||||||||| || || |||||||||||| ||| | |||| ||||| || Sbjct 38426 CAACGCTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAAT 38367 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| ||||| ||||| || ||| | ||| Sbjct 38366 ATTCAGAAGGAGTCGACTCTGCACCTTGTG 38337 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || ||| | || || || | | Sbjct 38774 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 38715 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| ||||||||||| || || || || ||||| || ||| Sbjct 38714 GACACGATTGACAATGTTAAATCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCAA 38655 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || ||| |||||||| | | |||| || || ||| Sbjct 38654 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 38595 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || |||||||| |||| |||| || || Sbjct 38594 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 38548 >seq535 Length=134152 Score = 149 bits (164), Expect = 6e-31 Identities = 957/1524 (63%), Gaps = 56/1524 (4%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || ||||| | || || || |||||||||| || | |||||||| Sbjct 103090 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 103031 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||||| || || || || | |||| | || || |||||| || || | | Sbjct 103030 CACTCGTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 102971 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTT--CCTTGAGCGACGACCAGTCCCACAAAT 138685 || || | ||| || ||||||| ||| ||||||| | ||||||||| | | Sbjct 102970 CTGTTGCGGACACCATGTTGCTTGAT--GTTGGCCTTGAGAGCGTCCCAGTCCCAGAGGT 102913 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTG 138741 | || || ||||||||| || ||||| | || ||| |||| ||| Sbjct 102912 CTGAGGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACA----GGAGAT 102857 Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCA 138801 || ||||| | |||| ||| ||| | |||| || | || || ||| Sbjct 102856 CCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCA 102797 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861 | | ||| || || || |||| || ||||| || ||||| | |||| | Sbjct 102796 GCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAA 102737 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 |||| ||||| ||| ||||| ||||| ||||| ||||||| |||| ||| | Sbjct 102736 GGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTG 102677 Query 138922 TGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTTACATCGATGAT 138977 ||||||| || ||| ||||| || || || || || ||||| || |||||||| Sbjct 102676 TGGCGCATGTT----GCTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGAT 102621 Query 138978 TTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGT 139037 ||||| | || || || || || | ||| | | | | ||||| |||||| Sbjct 102620 CTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTC 102561 Query 139038 GCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCA 139097 ||| || || |||||||| | | | || || || || | |||||| Sbjct 102560 ACCCTTGTGGTAGTCGACGAACTGGGGCA-------GAGCCAGG--GAAGCAAGGTTGCA 102510 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 || || || ||||| ||| | ||| |||| ||| || | || | || | Sbjct 102509 TACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCG 102450 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 || ||||| | || | || ||||| || ||||| || ||| ||||| ||||| | Sbjct 102449 AATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAA 102390 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAG--CTTGT 139275 ||| | ||||| || || | ||| | ||| | | | |||| || | |||| Sbjct 102389 CGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAGTACCA-AAGTTTCTGGGCCTTG- 102332 Query 139276 AT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCG 139331 || ||| | | || || | |||| ||||| || || || | ||||| Sbjct 102331 ATCGTCTTGCGACCCTTAC----CGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTC 102276 Query 139332 TTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCC 139391 |||||||||| ||| | || | | |||| || || ||||| | | ||| |||| Sbjct 102275 TTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCC 102216 Query 139392 GTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCG 139451 ||| || |||||| ||||||||||||| || ||||| | ||||| | || || || Sbjct 102215 GTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACG 102156 Query 139452 CGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGC 139511 || | || ||| || ||| | | || ||||| || || || || || Sbjct 102155 GGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGC 102096 Query 139512 GTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGAC 139568 |||||| || || || |||||||| | || || || ||| ||||| || ||||| Sbjct 102095 GTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGAC 102036 Query 139569 GTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTT 139628 || || | | || ||||| || |||| ||| || | | ||| ||| || ||||| Sbjct 102035 GTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTT 101976 Query 139629 GGTGCTACGG----ATGGGA-CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATT 139683 ||| | ||| || ||| | || || |||| | ||| || |||| ||||| Sbjct 101975 GGTAC--CGGCGATATAGGAGCCAGTG---GCACGGATGCGATGGACGTTGAGACCGATA 101921 Query 139684 CCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTAT 139742 ||||| | | ||||| || | | ||| || | | || ||||| || || || Sbjct 101920 CCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCCTCAAT 101862 Query 139743 GCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGC 139802 ||||||||||| ||| ||||| ||||||||||| | || | | |||||||| Sbjct 101861 GCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGC 101802 Query 139803 TGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTC 139862 || || || || ||||| ||||| | || | ||||| | | ||| ||||| Sbjct 101801 GTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTC 101742 Query 139863 GATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922 |||| | | | |||| | || |||||| |||| || ||||| | ||| || || Sbjct 101741 GATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCATGATCATGTGCTG 101682 Query 139923 GATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTA 139982 || ||| | | | ||| | || || || ||| |||| || |||||| | Sbjct 101681 TGGCCTCTCGACAATCTTGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAA 101622 Query 139983 GCCAAAGTACCTATAGTTGAAATC 140006 ||| || || ||||||||||| Sbjct 101621 GCCGAAATATTGGTAGTTGAAATC 101598 >seq757 Length=145172 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | | | Sbjct 70611 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 70670 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 70671 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 70730 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| || ||||| ||||| || | | |||| || || ||| Sbjct 70731 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 70790 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || || ||||| || || ||| | ||| |||| |||| || || || Sbjct 70791 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGTGG 70840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449890030472880