Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq464 132 8e-25 seq535 104 4e-16 seq111 102 1e-15 seq668 89.7 8e-12 seq547 89.7 8e-12 seq433 86.0 1e-10 >seq464 Length=116129 Score = 132 bits (146), Expect = 8e-25 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 |||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||| Sbjct 1186 TACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCATA 1245 Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027 | ||| ||||||| | ||||| ||||||| || || | |||| || | | Sbjct 1246 AAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGACAAGAAGTCTG 1305 Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087 || ||||| || ||||||||||| ||| ||| |||||||||||| | ||| || | Sbjct 1306 TCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCAG 1365 Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGA 794133 |||| || ||| | | |||||||| ||| |||| ||| || |||| Sbjct 1366 GGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGA 1411 Score = 86.0 bits (94), Expect = 1e-10 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 794587 TCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCG 794646 ||||||| ||| |||||||| ||||||||||| ||||| ||||| ||||| || || | Sbjct 1803 TCCTTGATGTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATG 1862 Query 794647 ATCTGGAAGCCATAAAAGCA 794666 ||||||||||| || ||||| Sbjct 1863 ATCTGGAAGCCGTAGAAGCA 1882 >seq535 Length=134152 Score = 104 bits (114), Expect = 4e-16 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGC 2071860 ||||| || |||| |||||| | | | |||||||||| || | ||||| | Sbjct 102256 AGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTC 102197 Query 2071861 ATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTG 2071920 || ||||| || |||| || || || || || || || || |||||||||| Sbjct 102196 ATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTT 102137 Query 2071921 CCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAG 2071980 ||||||||||| | |||||||| | |||| || || |||||||||||||| |||||| Sbjct 102136 CCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAG 102077 Query 2071981 CAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||||||| || ||||||| ||| || Sbjct 102076 ATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 102045 >seq111 Length=450714 Score = 102 bits (112), Expect = 1e-15 Identities = 170/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 2019195 CTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCG 2019254 || ||||| ||||| || ||| || | || || || ||||||||| || | || || | Sbjct 361769 CTCCCGCCAGGCCGACATAAGCTGGTGATTCTTGACGAGGCCGACAGCATGACATCTGGC 361828 Query 2019255 GCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTG 2019314 || ||||||||||| | || ||||| | ||| ||||||| ||| | || || | Sbjct 361829 GCACAGCAGGCCCTGAGGCGAACTATGGAGATCTACTCCAACACTACGAGATTCGCTTTC 361888 Query 2019315 GCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGC 2019374 || |||||| ||| | |||| || |||| ||| || ||||||||| | || Sbjct 361889 GCGTGCAACCAGTCAAACAAAATCATAGAGCCCCTGCAGTCTCGATGCGCCATCCTCCGG 361948 Query 2019375 TTTGCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAA 2019434 | |||||||| || ||||||||| | | | || || | |||| || || ||||| Sbjct 361949 TACGCGCGCCTGACGGACGCCCAGGTGGTCAAACGGCTACTGCAGATCATTGAGGCCGAG 362008 Query 2019435 AAGGTC 2019440 |||||| Sbjct 362009 AAGGTC 362014 >seq668 Length=471782 Score = 89.7 bits (98), Expect = 8e-12 Identities = 94/121 (78%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 2233091 GTCGCCTTTCCCACCGAGACCGTCTATGGCCTCGGCGCCGACGCGGCGT-CAGACGAGGC 2233149 |||| ||| || |||||||| || ||||| ||||| || ||||| | ||| || || Sbjct 213627 GTCGGCTTCCCAACCGAGACGGTTTATGGTCTCGGAGCAGACGCCACACGCAG-CGCTGC 213685 Query 2233150 CGTACAGCGCATCTTTGACGCCAAGGGCCGACCGTCCAACAACCCGATCATCGTGCACGT 2233209 ||| | |||||| || |||||||| || |||||| |||||||| ||||||||||||| Sbjct 213686 CGTCAGGGGCATCTATGCTGCCAAGGGTCGGCCGTCCGACAACCCGCTCATCGTGCACGT 213745 Query 2233210 G 2233210 | Sbjct 213746 G 213746 >seq547 Length=293497 Score = 89.7 bits (98), Expect = 8e-12 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 2175076 TGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGT 2175135 |||||||||||||||| || || ||||| || |||| || | || |||| ||||||| Sbjct 157876 TGCCGTCGGTGCCGTTCTTGAAGCCGACGGGGAACGATAGGCCAGAGGCCAGCTCGCGGT 157935 Query 2175136 GCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCC 2175172 | | |||||||||||||||||| || || || ||||| Sbjct 157936 GAAGCTGGCTCTCGGTGGTGCGGGCACCGACTGCGCC 157972 >seq433 Length=160720 Score = 86.0 bits (94), Expect = 1e-10 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||||||||| || ||||||||| |||| || || ||| ||| Sbjct 99074 GTACTTGGTAACAGCCTTGGTACCCTCAGACACGGCGTGCTTGGCAAGCTCACCGGGCAA 99133 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCG 1485560 ||| || | || | |||||||||||| || Sbjct 99134 GATAAGCCTGACCGAGGTCTGGATCTCACG 99163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916103219840894