Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548785.1_202016-02-04] 1,346 sequences; 41,601,338 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq288 113 1e-19 >seq288 Length=58383 Score = 113 bits (124), Expect = 1e-19 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| ||||| || || ||||| ||||| | ||||| ||| ||| |||||| |||| Sbjct 38532 CAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCAGACACAATCGACAA 38473 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || || |||||||||||| || || || || ||| ||| ||| | | ||||| Sbjct 38472 CGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAACAACGCTTGATCTT 38413 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || |||||| |||| |||||| | || || | |||||||| | ||||| ||||| Sbjct 38412 TGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAATATTCAGAAGGAGTC 38353 Query 206364 TACTCTTCACCTTGT 206378 ||||| |||||||| Sbjct 38352 GACTCTGCACCTTGT 38338 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || ||||| ||||| || || ||| ||| Sbjct 38771 CAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCAGAC 38712 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || || ||||| ||||| || || || ||| |||||| || Sbjct 38711 ACGATTGACAATGTTAAATCCAAGATCCAAGATAAGGAGGGTATTCCTCCGGACCAACAG 38652 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| |||||||| |||||||||||||| |||||| | || || |||| |||||| || Sbjct 38651 CGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAACATC 38592 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 || || || |||||||| ||| Sbjct 38591 CAAAAGGAATCTACTCTGCAC 38571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181800418761666