Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548845.1_202016-02-04] 1,546 sequences; 39,325,514 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1126 127 2e-24 seq951 91.5 1e-13 seq916 89.7 4e-13 >seq1126 Length=50696 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||||| || ||||| |||||||| ||| || ||||| |||||| Sbjct 19894 ACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCC 19835 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| ||||||||| |||| || ||||| || || ||||| || |||||||||||| Sbjct 19834 AACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTGG 19775 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || |||||| | || | ||||| | ||||||||| | || | || ||| Sbjct 19774 ATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTG 19715 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || |||| ||| || || || ||||||||| Sbjct 19714 CCCGTCAAAGTCTTGACGAAGATCTGCATG 19685 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| |||| || ||| ||||| |||||||| ||| | || || ||||| Sbjct 19666 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 19607 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||||||| | || || || || || || ||||| || ||||||||||| Sbjct 19606 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 19547 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| ||| || | | ||||||||| | ||| | ||| ||| Sbjct 19546 ATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTG 19487 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| || |||||||||||| Sbjct 19486 CCAGTGAGGGTTTTGACGAAAATCTGCATG 19457 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || ||||| |||||||| || || || |||||| Sbjct 20123 CACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTC 20064 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || || |||| | ||| || || || || || || |||||||||||| Sbjct 20063 CAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTG 20004 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| ||| ||| || | |||| ||||| | || || |||| || | ||||| Sbjct 20003 AATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTT 19944 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || || || ||||| Sbjct 19943 GCCGGTAAGCGTCTTGACGAAGATTTGCAT 19914 >seq951 Length=38104 Score = 91.5 bits (100), Expect = 1e-13 Identities = 337/523 (64%), Gaps = 29/523 (6%) Strand=Plus/Plus Query 44789 CCCTGCGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATAACT 44848 |||||| | |||| |||||||| ||||| ||| || || ||| | ||| ||| Sbjct 7113 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACC 7172 Query 44849 TTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTT 44908 || ||| || || |||| ||||| | ||||| || | ||||| || |||| Sbjct 7173 TTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTT 7232 Query 44909 GCGGCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAA 44968 || | || || | | || | || ||||||| || ||||| || |||||| Sbjct 7233 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAG 7292 Query 44969 TTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGA 45028 | || ||| | || || ||||| |||||| |||||||||| ||| || | | || Sbjct 7293 CTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTC--CTGTTCT-CGCTC 7349 Query 45029 GTCGATCAAAAGTTGGACGCGCCCACC---------GTCAACGACAT-GTTCTCCGAAGC 45078 | || ||| || ||||| | || || || || ||| || || || Sbjct 7350 CT-GAACAACAG--------GCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTC-GATGC 7399 Query 45079 CGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAA 45138 || || ||| || ||| || | ||||| ||||| | | |||| ||||| Sbjct 7400 TGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAA 7459 Query 45139 CGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTC---CAGTT 45195 ||| || |||||| ||||||||||||||||||| || | ||||| ||| | | Sbjct 7460 CGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGG 7519 Query 45196 AAAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTT 45255 ||| | ||| | ||| | | ||||||||||| |||||| | || || || | Sbjct 7520 AAACGAG---AAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACT 7576 Query 45256 GGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATAC 45298 | ||||| || || || || ||||||||||| ||||| ||| Sbjct 7577 CGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTAC 7619 >seq916 Length=163989 Score = 89.7 bits (98), Expect = 4e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||| | ||| || ||||| | ||| || ||||| |||| Sbjct 100177 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 100236 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670 |||||||| || || || || || ||||||||||| ||| || || || | ||| Sbjct 100237 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 100296 Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729 | ||||||| | ||||||||| | ||| | || ||||| |||||||| || || || Sbjct 100297 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 100355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433822225821832