Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548845.1_202016-02-04] 1,546 sequences; 39,325,514 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1126 96.9 3e-15 >seq1126 Length=50696 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || ||||| |||||||| || | | ||| || |||| ||||||||||| || || || Sbjct 19648 TCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAA 19589 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || || || ||||| |||||||| || || || || || || || ||||||| Sbjct 19588 ATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTTACATTG 19529 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | ||||| || || || || | || | |||||||| || | ||||| ||| Sbjct 19528 TCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACG 19469 Query 64433 AAAATTTGCAT 64443 ||||| ||||| Sbjct 19468 AAAATCTGCAT 19458 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | ||||| || || | ||||| || || ||||| |||||||| | Sbjct 20141 ACCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGA 20082 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || || ||||||||||| ||| | || | || || ||||| || || Sbjct 20081 CAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGG 20022 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| || ||| || || || | ||| || | || || Sbjct 20021 GATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 19962 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | || | ||| |||||||| | || || ||||| |||||||| Sbjct 19961 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 19914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499635144364240