Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548845.1_202016-02-04] 1,546 sequences; 39,325,514 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq951 120 3e-22 seq1126 114 1e-20 seq446 84.2 2e-11 >seq951 Length=38104 Score = 120 bits (132), Expect = 3e-22 Identities = 342/522 (66%), Gaps = 29/522 (6%) Strand=Plus/Plus Query 47070 CCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACT 47129 |||||| | |||| |||||||| ||||| ||| || || || | || |||| Sbjct 7113 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAA-GTCAAC 7171 Query 47130 CTG-GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT 47188 || ||| || ||||||||||||| |||||||||| |||||||| || || Sbjct 7172 CTTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTT 7231 Query 47189 TGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGA 47248 ||| | || || | | || | || | ||||| || || || || |||||| Sbjct 7232 TGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGA 7291 Query 47249 GCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTAC-------- 47300 ||| |||||| | || || || || |||||| |||||||||||||| | | Sbjct 7292 GCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCT 7351 Query 47301 -AACACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGC 47359 |||| || | | | ||| ||| || || | || || ||| ||| || Sbjct 7352 GAACAACAG-GCCCAACAA-----GGAGGTT------GTGAAGGAGATTGTTGTCGATGC 7399 Query 47360 CGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAA 47419 ||| |||||| |||||| | | ||||| ||||| | | |||| ||||| Sbjct 7400 TGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAA 7459 Query 47420 CGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCT--- 47476 ||| | |||||| ||||||| || |||||||| ||| | || || || || Sbjct 7460 CGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGG 7519 Query 47477 AAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCT 47536 ||| | ||| | |||| || || |||||||| |||||| | ||||| || || Sbjct 7520 AAACGAG---AAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACT 7576 Query 47537 CGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 || |||||||||||||| |||||||| ||||| ||||| || Sbjct 7577 CGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTA 7618 >seq1126 Length=50696 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||||| || | ||||| || ||||| || ||||| ||| | Sbjct 19912 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 19853 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || | ||| ||||||||| |||||| |||||| || || ||||| Sbjct 19852 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 19793 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| ||| || || | | || | ||||| | | |||||| Sbjct 19792 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 19733 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || ||||| |||| ||| || || || ||||||||| Sbjct 19732 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 19685 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || ||| ||||| || ||||| ||| Sbjct 19684 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 19625 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || ||||| ||||||||| | || | || || || || ||||| Sbjct 19624 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 19565 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || |||||||||||| ||| ||| ||| | | |||| ||| || | |||||| Sbjct 19564 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 19505 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | ||| ||||| || || ||||| || |||||||||||| Sbjct 19504 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 19457 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || |||||||||||||| || || || ||| || ||||| || || Sbjct 20110 GTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGCTTGCCC 20051 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT- 127035 || ||||||| || || || || || || || ||||||||||| ||| | | || || Sbjct 20050 GCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCT-TGAATCTTTGATTT 19992 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || ||||| ||| ||||| | | || ||||||| || | ||||||||||| || | Sbjct 19991 GACGTTGT-CGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCG 19933 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || || ||||| Sbjct 19932 TCTTGACGAAGATTTGCAT 19914 >seq446 Length=190891 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || ||||||| |||||||| || || || || ||||||||| Sbjct 39049 TCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 38990 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||||| | |||| |||||| | ||| || || | ||| | Sbjct 38989 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATA 38930 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || ||||| || || || || || || ||||||||| Sbjct 38929 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 38894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475491610947040