Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548845.1_202016-02-04] 1,546 sequences; 39,325,514 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq446 100 3e-16 seq1126 91.5 1e-13 seq789 89.7 5e-13 >seq446 Length=190891 Score = 100 bits (110), Expect = 3e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| || ||| ||||| || |||||||||||| | ||| Sbjct 39112 AGACGCAGCACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTG 39053 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| ||||| ||||| ||||| |||||||| || || || || || || Sbjct 39052 CCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCC 38993 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | |||||| ||| ||||| || || || Sbjct 38992 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTG 38933 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| || ||||| Sbjct 38932 ATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 38895 >seq1126 Length=50696 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||||||| || || ||||| || |||||||||||| | Sbjct 19456 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAA 19397 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || ||| ||||| || ||||| |||||||| | |||||| || || || || Sbjct 19396 AGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGG 19337 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | || ||| || ||||| Sbjct 19336 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACC 19277 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 ||||| || ||||| || || || Sbjct 19276 TCGAGGGTGATGGTCTTGCCAGT 19254 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || | ||| || || ||||||||||| |||||||||||| | ||| | Sbjct 19903 AGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGT 19844 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||| || || || || |||| ||||| || || || || || || || Sbjct 19843 CCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCC 19784 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || ||| || ||| | ||||| || || || || || | || Sbjct 19783 TTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTG 19724 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || ||||| || ||||| Sbjct 19723 ATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 19686 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 134523 TCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 |||||||| |||||||||||| || ||| || ||| || ||||| || || || ||| Sbjct 19648 TCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAA 19589 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 || | || || || || || || || || || || || || || || || || | Sbjct 19588 ATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTTACATTG 19529 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | || ||||| || || || || | ||||| || || || || | ||||| ||| Sbjct 19528 TCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACG 19469 Query 134703 AAAATTTGCAT 134713 ||||| ||||| Sbjct 19468 AAAATCTGCAT 19458 >seq789 Length=123150 Score = 89.7 bits (98), Expect = 5e-13 Identities = 278/422 (66%), Gaps = 9/422 (2%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| | |||| || || || || || || || ||||||| | | | Sbjct 7301 CAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAGCGAGTCATC 7242 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 ||||| ||| | | |||||| ||| || || ||||| || || || | || | Sbjct 7241 GAAACCTACAACCTTATGTCTAGCAAATTCTTCACACACGCCTCCCCGACGCTTTTCAAC 7182 Query 7684 GCGGGCACAAACGC-GCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 || |||||| ||| | |||| ||||| || || || || | ||| || ||||| Sbjct 7181 GCCGGCACAC-CGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATGAAGGACGACAG 7123 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGC-GGC 7800 ||| || || || ||| |||| || | || ||| |||| || ||||| | ||| ||| Sbjct 7122 CATTGAGGGAATCTACGACACCCT-CAAGACTTGTGCCATGATCTCCAAG-ATGGCTGGC 7065 Query 7801 GGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAAC 7860 || || ||||| ||||| | | | || |||| || | |||| |||||| Sbjct 7064 GGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGGCTCCTATATCGCCGGTACCAAC 7005 Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920 || | | | ||| | | |||||| |||| |||||||| ||| | | || | || Sbjct 7004 GGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAGCTCGCTACGTC 6945 Query 7921 GACCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977 |||||||| || || |||| || ||| ||||||||| | |||||||||||||| Sbjct 6944 GACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCA 6885 Query 7978 GA 7979 || Sbjct 6884 GA 6883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505388633175920