Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548845.1_202016-02-04] 1,546 sequences; 39,325,514 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq789 172 7e-38 >seq789 Length=123150 Score = 172 bits (190), Expect = 7e-38 Identities = 411/614 (67%), Gaps = 22/614 (4%) Strand=Plus/Plus Query 117805 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 117861 |||||||||| || || || || |||| | || ||||||||||| || ||||||| Sbjct 5549 TGAACTGAATCGG-CTGGGCGGCT--GCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGA 5605 Query 117862 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCA 117921 | || |||||||| | | |||||| |||| | |||| | ||| || || Sbjct 5606 GACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGCA 5665 Query 117922 TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAA 117981 || || ||| | ||||| || || |||||| || || || || ||||| | || Sbjct 5666 TGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAA 5725 Query 117982 TCACA-TCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040 || | | | | ||| ||||| |||||| ||||||| ||||| |||| || ||| Sbjct 5726 CGACGGTACGTTG-CGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 5784 Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 118100 || | || || |||||||| || ||| | || || | | |||||| || | | Sbjct 5785 ATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCATGTCGTCT 5844 Query 118101 GACCAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAA 118156 ||||| ||||||| || ||||||| | || || | ||||| || || Sbjct 5845 GACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTGACTACCTGGAA 5900 Query 118157 CTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 118216 ||| || || || || | | || || |||| || || ||||||||||||||||| Sbjct 5901 CTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTCATT 5960 Query 118217 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276 ||| || | |||||| | ||| ||||| |||||||| || | ||| | |||||| || Sbjct 5961 GTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTTGCG 6020 Query 118277 GAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT---GT 118333 || ||| | || | | ||| ||||||||||||||||||| | ||| | | | Sbjct 6021 GACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---GAGGTCTGAAGG 6077 Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393 || | | |||||| || ||||||| || || || || | || |||||||| |||| Sbjct 6078 CTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTATGT 6137 Query 118394 CTCATATGGGCCCT 118407 | ||||| |||| Sbjct 6138 CGAGTATGGACCCT 6151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618423248739760