Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548855.1_202016-02-04] 1,514 sequences; 39,376,824 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq650 127 2e-24 >seq650 Length=198112 Score = 127 bits (140), Expect = 2e-24 Identities = 196/275 (71%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 ||||||||| |||||||| ||| ||| |||| | | |||| ||| |||| || || Sbjct 160162 GAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAA 160221 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC-CCCAGCC 146113 ||| | ||| ||||| ||||||||||| |||||||| || ||| | |||| | | || Sbjct 160222 GTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCC 160281 Query 146114 CGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGC 146171 | |||| | | ||||| || ||| |||||| |||||||||||||||| || | |||| Sbjct 160282 CAGCCC-GTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGC 160340 Query 146172 GGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCC 146231 || | || | ||| | ||| | |||||| |||||||| || || | Sbjct 160341 TCAGGG--GCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGC 160398 Query 146232 CCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 || | ||||||| | ||| || |||||||| |||| Sbjct 160399 CCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGGGA 160433 Score = 125 bits (138), Expect = 8e-24 Identities = 125/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749 || ||||||| | ||||||||| || || |||| |||||| | | ||||||| | Sbjct 159776 TCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCACT 159835 Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || |||||| | || | ||||| |||||||| | ||||||||| |||||||||||| Sbjct 159836 AGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGC 159895 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || || |||||||| | ||| |||||||| ||||||||| Sbjct 159896 ACGCCTAGGCCCATGTCGCACGACCGCTGGTAGAGCTGGCAG 159937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590065632796560