Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548855.1_202016-02-04] 1,514 sequences; 39,376,824 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq1065 82.4 5e-11 >seq1065 Length=50867 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 33167 TGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGC 33226 |||| |||||||| || || |||||||||||||||| | || || |||| ||| Sbjct 30719 TGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCGTCCATCCTCCAGCTGC 30778 Query 33227 TTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATCGCC 33286 || || ||| || |||||||| ||||| | || || || || || || |||| Sbjct 30779 TTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTT 30838 Query 33287 TGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTA 33346 ||| || | | || ||||| | || ||| || || || || ||||| || ||| Sbjct 30839 GATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTA 30898 Query 33347 AGAGTTTTTACGAAAATTTGCAT 33369 || || || ||||| |||||||| Sbjct 30899 AGCGTCTTGACGAAGATTTGCAT 30921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318771717955572