Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548855.1_202016-02-04] 1,514 sequences; 39,376,824 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq650 113 4e-20 >seq650 Length=198112 Score = 113 bits (124), Expect = 4e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 29748 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 29807 |||||| ||| || ||| || || || ||||| | ||| ||||| ||| || | Sbjct 159715 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGC 159774 Query 29808 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 29867 || ||||| || |||||||||||| || |||| | ||| | | || || | Sbjct 159775 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 159834 Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927 ||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| ||||| Sbjct 159835 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 159894 Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 || || || |||||||| | ||||| |||||||||||| || Sbjct 159895 CACGCCTAGGCCCATGTCGCACGACCGCTGGTAGAGCTGGCA 159936 Score = 113 bits (124), Expect = 4e-20 Identities = 268/400 (67%), Gaps = 10/400 (3%) Strand=Plus/Plus Query 29989 ACGTAAAACTG---ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30045 ||||||||||| | ||||| |||||||| || || |||| || | ||| ||| Sbjct 160037 ACGTAAAACTGCGCAAACATG---TGGCACGGCGGCAGGACCATAAGCTTGAGGTCCTTG 160093 Query 30046 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACG 30105 |||||||| || | | | ||||| | ||| | |||||| | | || || |||| Sbjct 160094 GGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTATGGGTTCGTGCGGAGCTTGTGCACG 160153 Query 30106 GCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCT 30165 | | ||||| || || ||| |||| ||||||||| ||| ||||| || Sbjct 160154 ACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCG 160213 Query 30166 GCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGC 30225 || || || || | ||| ||||| ||||| || || |||||||| ||| | || | |||| Sbjct 160214 GCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGC 160273 Query 30226 TCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC- 30284 | || ||| | ||||| || || | | |||||| ||||||||||||| ||||| Sbjct 160274 TGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCG 160333 Query 30285 -CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 30343 | || | || | ||| | | || | || ||||||||||||||||| | Sbjct 160334 GCGTCGCTCAG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGA 160391 Query 30344 CGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 |||||| | | ||||| | ||| ||||| || || || Sbjct 160392 TCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 160431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408610060239122