Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548855.1_202016-02-04] 1,514 sequences; 39,376,824 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1251 351 1e-91 seq1065 158 1e-33 seq1216 154 2e-32 seq302 125 8e-24 seq894 82.4 9e-11 >seq1251 Length=56847 Score = 351 bits (388), Expect = 1e-91 Identities = 1158/1783 (65%), Gaps = 47/1783 (3%) Strand=Plus/Minus Query 80005 ACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGATAGTACATGCCCGTCTTG 80064 || || | |||||| |||| ||| |||| |||||||||| ||||||||||| |||||| Sbjct 51340 ACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATGCCGGTCTTG 51281 Query 80065 AGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCC 80124 || || |||||||||| | ||||| || ||| ||| | | || |||| | Sbjct 51280 AGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGC 51221 Query 80125 ATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATTTCA 80184 ||| |||||| || ||||| ||||| ||||| || ||||| || || ||||| | | Sbjct 51220 ATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGA 51161 Query 80185 ATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACACCTTACGAAGCTCCTCTGGA 80244 | | | ||| | || ||||| || || || | ||| ||||| || Sbjct 51160 ACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 51101 Query 80245 ATGT---CCAGATTTTGCACACTGCCACCGTCCTTTACAATTTGATTTTTCAATTCAGAC 80301 ||| | | || || | ||| || || | || | || |||| || Sbjct 51100 ATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCATGTCGTCT 51041 Query 80302 GTCCAGACACCAAGCTTGTGCAGATCTTTCA-CAAG--GTGCTTGTTAATCATGACAAAC 80358 | ||| | |||||||| | |||||| || | ||| | | ||| | | || || Sbjct 51040 GACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTACCTGGA---AC 50984 Query 80359 TCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTG 80418 || || || || || || | || | ||| | ||| || |||||||| ||| ||| Sbjct 50983 TCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTCATTG 50924 Query 80419 TTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGC 80478 || || ||||| || | |||||| || || ||||| ||| | || | || || || Sbjct 50923 TTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTTGCGG 50864 Query 80479 AGGCCGTGCTTCTTGATAT---CCTCGCGCAAATCTGA---CCAAAAATCAACCCCAACG 80532 | || || | |||||| | ||| | | || | ||| | || || | Sbjct 50863 ACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAGAGGTCTG----AAGG 50808 Query 80533 CTGTGACC--CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACG 80590 || |||| ||||||||||| ||| | || |||| || | ||||| ||| || | | Sbjct 50807 CT-TGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTATG 50749 Query 80591 TCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAA 80650 || ||| || |||| | || || |||| || || | | || || ||||| || | Sbjct 50748 TCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTAGA 50689 Query 80651 TGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCA 80710 || |||||||| |||||| | | | || |||| || ||||| | || | | Sbjct 50688 TGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAAGGCAGACGGA 50629 Query 80711 TCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGT 80770 | ||| |||||||||| || || ||||| | |||| || | ||||||| ||| Sbjct 50628 GTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTGTGGCGCATGT 50569 Query 80771 TCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTG 80829 | | | || |||||| | | ||||| |||| ||||||| ||| |||||| Sbjct 50568 T-GCTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGATCTTGTTGAGGTTG 50510 Query 80830 CGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT----- 80884 || ||| || | || || ||||| ||||||| ||||||| ||| ||| | Sbjct 50509 CGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTCA--CCCTTGTGGT 50452 Query 80885 --TC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCAT 80941 || || || || || |||||| || || ||||| || || ||||| |||| Sbjct 50451 AGTCGACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATACAGCAACCTCGTCAGGGG 50392 Query 80942 CTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCT 81001 | | |||||| || |||||||| | || || ||| ||||| ||||| |||| Sbjct 50391 CAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCT 50332 Query 81002 GGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCT 81061 |||| |||| |||||| |||||||| |||| ||||| |||| ||||| || Sbjct 50331 GGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCTCAGTCT 50272 Query 81062 GTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTT 81121 | | || ||||||| | ||||| | | ||||||| | |||||| || || Sbjct 50271 GAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCTTGATCGTCTTGCGACCCTTACCGG 50212 Query 81122 CGGCCACATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCT 81180 | | ||||||| | || | ||||||| |||||| | ||| | | |||| | Sbjct 50211 CCTGCTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCC-GCGAGGCCA 50153 Query 81181 GGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAA 81240 ||||||||||| |||||||||| | ||||||| || ||||| || ||||||||| Sbjct 50152 GGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAAC 50093 Query 81241 GCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGG 81300 ||||||||||| || ||| ||||||||| ||| || |||||| | || ||| Sbjct 50092 AGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGG 50033 Query 81301 TTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCG 81360 || | | ||||| || || | || || || ||||| ||||| || || | ||| Sbjct 50032 TTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCA 49973 Query 81361 ATCGACCCCTTGCG---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACA 81417 | | || ||| ||||||||||| |||||| || || || ||| || ||| Sbjct 49972 AAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACA 49913 Query 81418 CGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTG 81477 |||| ||| || | || || | || ||||| ||||| ||||| || || || Sbjct 49912 CGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTG 49853 Query 81478 GCGCGCACCTTGCTGATTGA----AAGACCGATGCCACCTGACCACTTTGAAATCTGAGC 81533 || || | ||| ||| || |||||||| || || | | ||| || ||| || Sbjct 49852 GCACGGA---TGC-GATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGC 49797 Query 81534 ACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAA 81593 ||| || | ||| || || |||||||| ||||| || | ||||| |||| || ||| Sbjct 49796 ACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAA 49737 Query 81594 ACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAAT 81653 || |||| ||||| || |||||| ||||| || || |||| ||||| | Sbjct 49736 GCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGT 49677 Query 81654 GAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTG 81713 ||| | | | ||||| |||| |||||||| |||| || ||| | |||||| Sbjct 49676 GAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCA 49617 Query 81714 AATACCGATAGCTACACGCATAAACATGTACTGGGGCGTCTCG 81756 ||||| | ||| |||||||| | ||||| ||| ||| ||||| Sbjct 49616 GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCG 49574 >seq1065 Length=50867 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || || || |||||||| ||||| | ||||| ||||| Sbjct 31377 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 31318 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||| | ||| | ||| | || || |||||||||||||| |||||||| ||||| Sbjct 31317 GATACCATCGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 31258 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || ||||| ||||| ||||| || ||||| | ||| ||||| | ||||| || Sbjct 31257 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 31198 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||||| ||| || ||| | ||| | ||||| || ||||| Sbjct 31197 ATCCAAAAGGAGAGCACCCTCCATTTGGTCCTTCGTCTCCGTGGTGG 31151 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || |||||||| || || | ||||| ||||| Sbjct 31149 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 31090 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | || | || || || ||||||||||| |||||||| ||||| Sbjct 31089 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 31030 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| | ||||||| || || || | ||||| || Sbjct 31029 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 30970 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 ||||||||||||| ||||| || | ||| ||||||| || ||||| Sbjct 30969 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 30923 Score = 140 bits (154), Expect = 4e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||||||||||||||| || || || || || ||||| || Sbjct 30921 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 30862 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || | || ||||| ||||||||||| || || || ||||| Sbjct 30861 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 30802 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||| | || ||||| || ||||| || ||||||| || ||||| | || || ||| Sbjct 30801 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAAT 30742 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| || ||||| || || || | |||||||| || || || Sbjct 30741 ATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGGTCA 30692 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||| ||||| | |||| ||| | || | ||| | Sbjct 31581 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACGTCAAGTCG 31522 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || |||||||||||||| || ||||| ||||| |||||||| |||||||| || ||| Sbjct 31521 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAG 31462 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||||||||| | ||| || || | ||||| || |||| ||||| ||||| || Sbjct 31461 CAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGAGAGTACTCTCCAC 31402 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || || | || || || ||||| Sbjct 31401 CTCGTGCTCCGCCTCCGTGGTGG 31379 >seq1216 Length=69305 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| ||||| |||||||| || || ||||||||||| || |||||||| ||||| Sbjct 29022 ATCATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCG 28963 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 | || | ||| | ||| | ||| | || || |||||||||||||| || || || ||| Sbjct 28962 AGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGAC 28903 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| | || ||||| || ||||| || ||||| | | ||||| | ||||| Sbjct 28902 CAGCAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTAC 28843 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || |||| ||||| ||| || || || || ||||||| || ||||| Sbjct 28842 AACATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 28793 >seq302 Length=103870 Score = 125 bits (138), Expect = 8e-24 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| || || |||||||| || || | ||||| ||||| || | || Sbjct 98193 CTTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGAT 98134 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 | ||| ||||| | || ||||||||||||||||||||||| || ||||| |||||||| Sbjct 98133 CGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCT 98074 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || |||||||| ||||| | ||||| | ||||| || | ||||| || |||| || Sbjct 98073 TATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 98014 Query 27594 GG 27595 || Sbjct 98013 GG 98012 >seq894 Length=360397 Score = 82.4 bits (90), Expect = 9e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 64771 TCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTG 64830 || || |||||||| || ||||| ||||||||||| |||||| | || || |||||||| Sbjct 358819 TCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTC 358878 Query 64831 ATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTC 64878 ||||| || || ||||| || ||| || ||||| | ||||||| Sbjct 358879 ATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTC 358926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570299606875680