Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548855.1_202016-02-04]
1,514 sequences; 39,376,824 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1065 107 1e-18
seq1216 84.2 1e-11
>seq1065
Length=50867
Score = 107 bits (118), Expect = 1e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || || || || ||||| ||||| ||||||||||| || |
Sbjct 30921 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 30862
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | || | | ||| ||| ||| ||||| || ||| | ||||| || |||
Sbjct 30861 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 30802
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||||| || ||||| ||||| || ||||| || | ||| || | ||||||||
Sbjct 30801 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGACGAACCCTGTCTGATTACAAT 30742
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 30741 ATTCAGAAGGAGTCGAC 30725
>seq1216
Length=69305
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || ||||| || || || || || |
Sbjct 29019 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 28960
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || || ||||| || ||| | || || || ||
Sbjct 28959 GACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 28901
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || ||||||||||| || || || |||| | || | ||| |||||
Sbjct 28900 GCAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAA 28841
Query 23790 CATACAAAAAGAG 23802
||| || || |||
Sbjct 28840 CATCCAGAAGGAG 28828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338003363089112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |