Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001548855.1_202016-02-04] 1,514 sequences; 39,376,824 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1065 190 4e-43 seq1216 159 7e-34 seq302 134 3e-26 seq951 113 9e-20 seq894 86.0 1e-11 >seq1065 Length=50867 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | || ||| ||||||||||||||||| | Sbjct 30922 ACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 30981 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| |||||||| | || || || || ||||||| || |||||||| || Sbjct 30982 CAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGG 31041 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||||||||||||| | ||| || | || || ||||| |||| ||||| Sbjct 31042 AATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGAC 31101 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 31102 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 31149 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || || || ||||| |||| Sbjct 30694 ACCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGA 30753 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || || |||||||||||||||||||||||| ||| Sbjct 30754 CAGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGG 30813 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||| ||||||| ||| ||| | ||||| ||||| |||| ||| || Sbjct 30814 GATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 30873 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| || || || || | ||||| ||||| || ||||| Sbjct 30874 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 30921 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| ||| | ||||| || ||||||||||||||||| | | Sbjct 31151 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 31210 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| || || || || || || || | ||||||||||| ||| Sbjct 31211 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 31270 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | ||||| | ||||| || || || | ||||| Sbjct 31271 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 31330 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | || |||||||| || || | || || ||||| |||||||| Sbjct 31331 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 31377 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || || || | || || || || |||||||||||||| | | Sbjct 31379 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAA 31438 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| ||||| || |||||||| || | ||| |||||||| || Sbjct 31439 AGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGG 31498 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | || ||| | ||||| || || || || || Sbjct 31499 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACC 31558 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 31559 TCGAGGGTGATGGTCTTGCCAGT 31581 >seq1216 Length=69305 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||||| || || |||||||||||||| | Sbjct 28792 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 28851 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||| ||||| || || || |||||||||||||| || || ||||| || Sbjct 28852 CAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGG 28911 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| | || || Sbjct 28912 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCAC 28971 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 28972 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 29019 >seq302 Length=103870 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || ||||| ||||| | || || || |||||||| Sbjct 98014 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 98073 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||||||| ||||| ||||||||||| || ||||| | || || | ||| Sbjct 98074 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 98133 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| || | ||||| ||||| || |||| |||||| ||||| Sbjct 98134 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 98192 >seq951 Length=28568 Score = 113 bits (124), Expect = 9e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 315651 GTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAG 315710 |||| |||| | | || ||||| |||| ||||| ||||||| | || ||||||||| Sbjct 20372 GTGAGTAATGATGATGACACCACCCTCGAACTTCTTGAGCGCCTTGGACAGGGCACCGAG 20313 Query 315711 ACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCA 315770 | || ||||||| ||||||| ||||||||||||||||| | ||| || | ||||| Sbjct 20312 AGAGTCACGGTCCAAGTAGTTGGTAGGCTCATCAAGAACGATCAAGTGAGGACGCTGCCA 20253 Query 315771 TAGAGC-GGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAG 315829 |||| |||| | | |||| ||| | || ||||||||||| ||||| ||||| | Sbjct 20252 -CGAGCAGGCGGCAAGGACGACCTTGACACGCTGTCCACCAGACAGACCACGCATGCGCG 20194 Query 315830 AATGAG 315835 | |||| Sbjct 20193 AGTGAG 20188 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| || || | ||| |||| || || | ||| || || ||||| || | ||| Sbjct 18958 GGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACCG 18899 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148 ||||||||||||||||| || || | || ||| ||| | | |||| | ||| ||| Sbjct 18898 TTGGGGCCGCAAAGACCGTAACGCTGGCCACGCTTGAGACGGAGATGGGTCTGGTTGAGA 18839 Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||||||| |||| || || || |||||| || | ||||||||||| || Sbjct 18838 AGAATCTTGGCACCGTAGGCGAGCGAGAACGTGCAGTTGCACAGGTCCTCACC 18786 >seq894 Length=360397 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288 |||||||| || | || ||| ||| || || || || || ||||| | || | || Sbjct 359035 GGCATGAACGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTC 359094 Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348 || || || ||||||| || || ||| ||||| |||| |||||||||| ||| Sbjct 359095 GCCCTGGGAAACGAGAAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATC 359154 Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGT 230408 |||||| || || || ||||||||||| || || || |||| || |||| ||||| Sbjct 359155 TCACTCGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAAAAAGCCGGT 359214 Query 230409 GT 230410 || Sbjct 359215 GT 359216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046718895222156