Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq3099 100 2e-16 >seq3099 Length=1841 Score = 100 bits (110), Expect = 2e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 20912 CAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTG 20971 |||||| | | | || | || ||||||| | ||| ||||| || || |||| | ||| Sbjct 473 CAGCTGCATCCGGAGTGCGTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTG 532 Query 20972 CACAAAGTCTCCCGGGGTC-AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGT 21030 | | | |||||| | || |||||| | | || |||| | |||||| || |||| Sbjct 533 CGTCA-GCGACCCGGGCACTAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGT 591 Query 21031 AGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGC 21090 ||||||| ||||| || || || || |||||||||||| ||||| |||||| ||||||| Sbjct 592 AGCTGGCAATGTTGAAGGGCACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGC 651 Query 21091 AG 21092 || Sbjct 652 AG 653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427738702477920