Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1041 170 4e-37 seq1564 152 9e-32 seq583 125 1e-23 seq2540 122 2e-22 seq1449 104 4e-17 seq1136 84.2 4e-11 >seq1041 Length=12260 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || || || ||||||||||| || ||||| Sbjct 2458 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 2517 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || ||||| || |||| |||||||| || ||| Sbjct 2518 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 2577 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | || || || || ||||||| || || || Sbjct 2578 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 2637 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || ||||| | ||||||||||| |||||||| Sbjct 2638 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 2684 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || ||||| || || || || ||||| || Sbjct 2230 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 2289 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || | | ||||||||| || || Sbjct 2290 AGGGTTCGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 2349 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||||| |||||| ||||| ||||||| ||||| ||| Sbjct 2350 ATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACT 2409 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || || ||||||||||| || ||||| Sbjct 2410 TCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 2456 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || || ||| ||| ||||||||||| || ||||| Sbjct 2686 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 2745 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| || ||||| || || | ||||||||| || ||| Sbjct 2746 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 2805 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||| || |||||||| || | || || || Sbjct 2806 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 2865 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || |||||||| |||||||| |||||||| Sbjct 2866 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 2912 >seq1564 Length=7954 Score = 152 bits (168), Expect = 9e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | ||| || ||| ||| || |||||||| || ||||| Sbjct 4436 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 4377 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||| || || || | |||||| ||||| || || | | || ||||| || || Sbjct 4376 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 4317 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| ||| || || || Sbjct 4316 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTCGACTCCAC 4258 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || |||||||||||||||||||| |||||||| || Sbjct 4257 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 4207 >seq583 Length=20149 Score = 125 bits (138), Expect = 1e-23 Identities = 135/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | || || || | |||||| || || || || Sbjct 9870 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGATA 9811 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || ||||| || |||||||| |||||||| | ||| || ||| Sbjct 9810 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 9751 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || |||||||||||||| || || || || ||||| ||||| Sbjct 9750 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 9692 >seq2540 Length=3238 Score = 122 bits (134), Expect = 2e-22 Identities = 661/1041 (63%), Gaps = 48/1041 (5%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || || |||||| |||||| || || ||| |||||| Sbjct 2186 CGCCACTGGATGTACTCGGAAGGAGTGCTGTCCAAGTGGTTGTCGATGTGGGCGAAAGCG 2127 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| |||| | | || ||| || Sbjct 2126 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCAGCAGTGGGG 2067 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 ||| || || ||||| |||||||| |||| ||| || ||||| ||||| ||||| Sbjct 2066 ATAAGCTCACCAGTCAGGACGTTGATGAGAGTAGACTTTCCGGCACCGTTGGGACCAATG 2007 Query 225161 ACGCCAATCCGGGATG--ACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGC 225218 ||| |||| ||||| | | ||| ||| || | | || ||||| || ||| Sbjct 2006 ACGGCAATACGGGAACCAAGAGAGCA--CTGGAAGGTGATGTCGCTGA-----TCTGGGG 1954 Query 225219 CAGTTTGGTAAGCAAAGGCCACGCCAC--GCAG--CTTCATGATGGCACGGT-------- 225266 | |||| || | ||| | || | || | || || |||||||| Sbjct 1953 C---TTGG--AGGTA---CCAGGGTACTGGAAGTCCATCTTGGTGGCACGGAGAATGGCC 1902 Query 225267 ----CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACC 225322 |||||| | | |||||| ||||| |||||||||||||| ||| || | Sbjct 1901 TTGGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGTGAACTCCATCTCA 1842 Query 225323 GCGTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGG 225382 | | | || ||||||||||| ||| ||| | ||| ||||| | |||| Sbjct 1841 GAGGCACCGAGCTCGTAGTAAGACTTGGCCGAGGGGCACTTCTTGACGAACTCCTTCAGG 1782 Query 225383 TTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACAC 225441 || || ||| | ||||||||| || |||| ||||| || ||| | ||| || Sbjct 1781 TTACCACGGTAACGCTTGAGCTTGAAACGCT---CGTAGTGAACGATGTGCTG-GCAGAC 1726 Query 225442 TGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCT 225500 ||| ||||||| |||||||| ||||| |||||||| | || | | || | | Sbjct 1725 GTTGTCGAGGAAGCTGGAGTCGTGCGACACGATGATGGAGGTGCAAG---GGGAGTTC-T 1670 Query 225501 TGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCA 225560 ||||| | ||||| ||||| | ||||||| |||||| || || ||||| | Sbjct 1669 GGAGGTACTCCTCAAGCCACTTGACGTTCTTCACGTCCAAGTGGTTGGTGGGCTCGTCGA 1610 Query 225561 GAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGC 225620 | | ||| || |||| | | || || ||| || |||| ||||||||| ||||| | Sbjct 1609 GCAACAGAATATCAGGAGCCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAAC 1550 Query 225621 CCCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGA 225680 | ||||| || | | ||| | |||| | | | ||| || ||| |||| || Sbjct 1549 CACCGGAAAGAGCGGTGATCTCACCAGAAACCATGGAGTCGGTGAAACCGAACTCGTTGA 1490 Query 225681 GCGTCTGGATAATGCGCTCGGGAG-AGCTGCGAGC--GGCAACGTTGGGGTCGGACGAGA 225737 | || || | | |||| | | | | | || | ||| | | | | | | Sbjct 1489 GGCGCTTGACGACGTCCTCGCGGGTAACCGAGACCTTGGCCTCCTCCAGCTTCTTCATGG 1430 Query 225738 GGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCG 225797 | || |||||| || | ||| | ||||| |||||| || ||| | || | Sbjct 1429 TCCAGTCGATGGTGGTCATCTCAGTATCAGCAGAGTCAAGGTCGTGCTCGACGAAGACGG 1370 Query 225798 TCCGGAGCT-GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGC 225856 || || || | || | |||||| ||||| | ||| | || || || || | Sbjct 1369 TCTTGACCTCGCTCTGCTT-GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATG 1311 Query 225857 AGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATG 225916 ||||| ||| || | |||||||| ||| || |||||| | | || ||||||| Sbjct 1310 AGGGTGGACTTTCCGGAACCGTTGGGGCCGCAAAGACCGTAACGCTGGCCACGCTTGAGA 1251 Query 225917 TTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCG 225976 ||| | || ||| || || |||||| |||| ||||| || |||||| ||| | | Sbjct 1250 CGGAGATGGGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCGAGCGAGAACGTGCAGTTG 1191 Query 225977 CACAGGTCCTCACCCTCCTCG 225997 ||||||||||||||||||||| Sbjct 1190 CACAGGTCCTCACCCTCCTCG 1170 >seq1449 Length=8806 Score = 104 bits (114), Expect = 4e-17 Identities = 303/462 (66%), Gaps = 10/462 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || || || |||||||| || || |||||||||||||| |||||| | Sbjct 7614 CATGACACCGGCTTTTTGGTACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCC 7555 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||| || ||| |||||| || || || ||||| ||| | | ||| || || Sbjct 7554 GAGTGAGATGTTCTCCATAAAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCC 7495 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | || | |||||| || ||||| |||||||| ||||||||| | ||| Sbjct 7494 GAGGGCGACAAGAAGTCTGTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTT 7435 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||| | | | |||||| | || || || || || | || | ||| || Sbjct 7434 CATGCCCAGGAGGGCGCAGGGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGC 7375 Query 10175 TTCCTCGACGATGCTCTTTACCACGTC----AAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || | || || ||| || || || ||| | | |||||| ||| ||| Sbjct 7374 ATCGACAACAATCTCCTTCACAACCTCCTTGTTGGGCCTG-TTGTTCAGGAG---CGAGA 7319 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||||||| |||| | ||| || ||||| || || ||||| ||||||||| | Sbjct 7318 ACAGGAGACAGGCAAAGTCGGTGTGTAGACCCTCATCACGCGAGATGAGCTCGTTGGAGA 7259 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 || |||||| ||||| || || || || |||||||| |||| | || | ||| Sbjct 7258 AAGTCAGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGC 7199 Query 10351 AGAACAGAAGACCCTCCACGCACA-CCCAGGCGACGAGGCGC 10391 ||| | | |||||| ||| ||| | | |||| |||||| Sbjct 7198 TGAAGAAGATACCCTCGACG-ACAGCGAAAGCGATCAGGCGC 7158 >seq1136 Length=11399 Score = 84.2 bits (92), Expect = 4e-11 Identities = 258/394 (65%), Gaps = 10/394 (3%) Strand=Plus/Minus Query 176892 ACAATTGGAGTCACGAAGCGCTTGAGGAACCCGGGGATCTCGAGCAGCGACGGGAACTGT 176951 |||| ||||| | ||| || || ||| ||||||||| ||||| || || ||||| Sbjct 7558 ACAACCGGAGTGATGAACTCCTGGAAGAAGTCGGGGATCTGCAGCAGAGAAGGAAACTGC 7499 Query 176952 GCATGGAAAAAGTTCAGCACTAGACCAGCAATATGTGAGCCGTCAACGTCCTGGTCTGCC 177011 | |||| ||||| | | ||||| ||||| ||||| ||||| || ||| Sbjct 7498 ACTTGGAGGAAGTTTATGAGAAGACCCTTGATATGACTTCCGTCGTGATCCTGATCAGCC 7439 Query 177012 ATAATAATCACAGACCCGTACCGAAGAGAGGACGCGTCCTTGTAGTTCACACCATTGCG- 177070 || || |||| | || || |||||| | ||| |||| | ||| ||| | Sbjct 7438 ATGATCATCAGATGACCATATCGAAGACCCTTGGTGTC--TGTA-TACACCTGTTTGTGT 7382 Query 177071 --GAGACCGAGAATTTGTTTGATGGCAGTAATCTCGGCGTTGTTAGTAATACTAGACACA 177128 |||||| || | |||||||| ||||| ||| || || | | Sbjct 7381 TTGAGACCCAGGAACTGTTTGATATTTTGGATCTCCTTGTTCTTCAGGATCTGATCTATG 7322 Query 177129 GACGCATCACGGACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGATCCCGA 177188 || ||||| || |||||||| | |||||| | ||||||||| | ||| ||| || || Sbjct 7321 GATGCATCTCGCACATTCAGCATCTTACCCCTGAGGGGGAACACGCCGATGCGGTCTGGA 7262 Query 177189 CCCACGACAGCAAGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCAAAATG 177248 ||| || ||| ||||||| || || ||||||||||||||| ||||| | Sbjct 7261 TCCAGGATGGCACGGCCAGCAACCGCCAGACCACGGGCAGAGTCACCCTCAGTCAACACT 7202 Query 177249 AGCGTGCACATTCCAGA--GTGCTTCGTGCCCGC 177280 ||||||||| || || |||||||||||| || Sbjct 7201 AGCGTGCAC--TCATGACCGTGCTTCGTGCCTGC 7170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921539983916880