Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1041 111 2e-19 seq1564 100 3e-16 seq583 86.0 6e-12 >seq1041 Length=12260 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || ||||| | | | ||||||||| |||||||||||| Sbjct 2685 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 2744 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || |||||| || || || || | | || || || |||||||||||||| Sbjct 2745 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 2804 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| || |||| |||| || | ||| |||| ||||| | Sbjct 2805 AATACCCTCCTTGTCCTGGATCTTCGACTTTACATTG-TCGATGGTATCGGAGGACTCGA 2863 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | ||| || ||||| || ||||| || |||||||||||| Sbjct 2864 CCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 2913 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || || || | | || |||||||| |||||||||||| | Sbjct 2458 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 2517 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| | || || || | |||| || ||||||||||||||||| Sbjct 2518 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 2577 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || ||| | |||| || | ||||| | ||||| || Sbjct 2578 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTG-TCAATCGTGTCTGAAGACTCGAC 2636 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | ||| | || || || |||| ||| || || || ||||||||| Sbjct 2637 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 2685 Score = 100 bits (110), Expect = 3e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| | || || |||||||||||| || |||| | | Sbjct 2949 CTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAA 3008 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 || |||||||||||||||||||| ||||| || ||||| ||| || || | | Sbjct 3009 AATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTT 3068 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 || | ||| ||| | ||||||||||||| || | || || ||||| Sbjct 3069 GTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 3116 >seq1564 Length=7954 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| || || | |||||| || || || |||| | | Sbjct 4401 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAA 4342 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| | ||||| |||||||| || ||||| || ||||| ||| || || | ||| Sbjct 4341 GATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATT 4282 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 || | | ||||||| ||||||||||||| | || | || || || || || || || | Sbjct 4281 GT-CGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGA 4223 Query 138602 CAAAAATCTGCATG 138615 | || ||||||||| Sbjct 4222 CGAAGATCTGCATG 4209 >seq583 Length=20149 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||| | |||||| |||||| || || || || | | ||| Sbjct 9872 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 9813 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTG 138542 | |||||||||||||| || || || || || ||||| ||| | || | || |||| Sbjct 9812 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTC-CTGAATCTTGGACTTCACATTG 9754 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||| | ||||| ||||| | || | || || ||||||||||| || || Sbjct 9753 -TCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCAC 9695 Query 138603 AAA 138605 || Sbjct 9694 GAA 9692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496218021734880