Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq628 161 1e-34 >seq628 Length=19608 Score = 161 bits (178), Expect = 1e-34 Identities = 446/675 (66%), Gaps = 28/675 (4%) Strand=Plus/Plus Query 115526 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 115582 |||||||||| || || || || |||| | || ||||||||||| || ||||||| Sbjct 2963 TGAACTGAATCGG-CTGGGCGGCT--GCCTGCGTCCGCAGGTAGTACATACCGGTCTTGA 3019 Query 115583 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCA 115642 | || |||||||| | | |||||| |||| | |||| | || || || Sbjct 3020 GACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGCA 3079 Query 115643 TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAA 115702 || || ||| | ||||| || || |||||| || || || || ||||| | || Sbjct 3080 TGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAA 3139 Query 115703 TCACA-TCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 || | | | | ||| ||||| ||||| ||||||| ||||| |||| || ||| Sbjct 3140 CGACGGTACGTTG-CGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 3198 Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCC 115818 || | || || ||||| ||||| || || | | |||| | | |||||| || Sbjct 3199 ATGCTGGCAATGTTCTGGATGGAGCCTCC---CTCGGCGATGATACGGTTCTTCATGTCG 3255 Query 115819 TTTGACCAGAGACCAATCTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAACAAC 115874 | |||||| ||||||| || ||||||| | || ||| | ||||| || Sbjct 3256 TCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTGACTACCTG 3311 Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934 ||||| || || || || | | || ||||||| || || |||||||||||||| Sbjct 3312 GAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTC 3371 Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||| || | |||||| | ||| ||||| |||||||| || | ||| | |||||| Sbjct 3372 GTTGTTGCCAAGGATTTGCGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTT 3431 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-- 116052 ||||| ||| | | ||| ||||||| ||||||||||| | ||| | | Sbjct 3432 GCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---GAGGTCTGA 3488 Query 116053 -GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 116111 | || | | |||||| ||| ||||||| || || || || | || |||||||| | Sbjct 3489 GGGCTTGACGTTCCACATGTCATACTGGAGAATGCCCTGTGAAACAGGAGATCCCTCGTA 3548 Query 116112 TGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 116171 |||| ||||| |||| |||| |||| | | | || || || ||||| || Sbjct 3549 TGTCGAGTATGGACCCTGCTCCTCTGCCAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTA 3608 Query 116172 CATTGTCTCAAAAAT 116186 || |||||||| || Sbjct 3609 GATGGTCTCAAAGAT 3623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613452337118640