Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1041 132 1e-25 seq1564 114 3e-20 seq583 111 4e-19 >seq1041 Length=12260 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| | ||| ||||| || |||||||||| ||||||||| | || || Sbjct 2464 CGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTG 2523 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| |||| ||||||||| |||||||| || ||||| ||||||||| ||| || Sbjct 2524 CGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCC 2583 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| || || || | ||||||| | || || |||||| Sbjct 2584 TCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAAC 2643 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| | ||| || || || || || Sbjct 2644 GTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTG 2681 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||||| || ||||||||||| ||||||||| | | |||| || || Sbjct 2701 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 2760 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| ||||| || || || || ||||||||| ||| || || ||| Sbjct 2761 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 2820 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||| || | | || || ||||| || |||||| Sbjct 2821 TGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTC 2880 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| || ||||| || Sbjct 2881 TTGCCAGTGAGGGTTTTGACGAAAATCTG 2909 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| |||||||||||||| || | ||||| |||| || || Sbjct 2236 CGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTT 2295 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| ||||||||||| || || ||||| | ||| || ||||| || || || Sbjct 2296 CGTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCC 2355 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||||||| || ||| |||| ||||||| | ||| || || | Sbjct 2356 TCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGT 2415 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || || || || ||||| Sbjct 2416 GTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTG 2453 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||||||||| |||||| |||| ||||||||| | | |||| || || Sbjct 2929 AGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCC 2988 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||| || || |||||||| ||||||||| || || || ||| Sbjct 2989 TCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 3048 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||| || | | || || || | ||||| ||| Sbjct 3049 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 3108 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 3109 TTGCCAGTGA 3118 >seq1564 Length=7954 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || |||||||| || |||||| |||| ||||||||| | || ||| Sbjct 4430 CGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTC 4371 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || || || || |||||||| ||||| ||||| | |||||||||||||| || || Sbjct 4370 CTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCC 4311 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| |||||| | | || || || | Sbjct 4310 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGG 4251 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| || || || || || || Sbjct 4250 GTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTG 4213 >seq583 Length=20149 Score = 111 bits (122), Expect = 4e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | ||| | || || ||||||||||| || || |||| Sbjct 9872 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAGCTGCTTGCCAGCAAAGA 9813 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | |||||||| ||||| || |||||| || ||||||||||| |||||| | Sbjct 9812 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 9753 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| ||||| | | || || ||||| ||||| ||||| || || ||||| ||||| | Sbjct 9752 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGA 9693 Query 199620 A 199620 | Sbjct 9692 A 9692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178813539309318