Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23]
7,154 sequences; 41,344,138 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1449 147 3e-29
seq628 145 1e-28
seq375 98.7 1e-14
>seq1449
Length=8806
Score = 147 bits (162), Expect = 3e-29
Identities = 229/322 (71%), Gaps = 4/322 (1%)
Strand=Plus/Plus
Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACGTGCCCAAG 1456519
|||||||||||||| || | | || | || ||||| ||| | || || |||
Sbjct 7300 GACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAG 7359
Query 1456520 CAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTG 1456579
|||| | ||||| || ||| |||| ||| |||||||| | | ||| || ||||
Sbjct 7360 GAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGC 7419
Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639
|| ||| | ||||||||||||| | || ||| ||||||||||| ||| ||||| |||
Sbjct 7420 GCCCTCCTGGGCATGAACGCCAAC-CTGATGAAGCAGTACATTGAGTTT-GTCGCTGACA 7477
Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699
| || || | || ||||| || ||||| |||||| | ||||||| ||| |
Sbjct 7478 GACTTCTTGTCGCCCTCGGAAACG-AGAAGGTCTACCGTGCCACCAACCCATTCGATTTT 7536
Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTAC 1456758
|||||| ||||| |||| |||||||||||||| |||||| |||| ||||||||||
Sbjct 7537 ATGGAGAACATCTCACTCGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTAC 7596
Query 1456759 GCCAAGGCCGGCGTCACCGCCA 1456780
|| ||||| |||| ||||
Sbjct 7597 CAAAAAGCCGGTGTCATGGCCA 7618
Score = 111 bits (122), Expect = 2e-18
Identities = 135/183 (74%), Gaps = 1/183 (1%)
Strand=Plus/Plus
Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944
|||||| ||| |||| || || || |||||| ||||||||||| |||||||||
Sbjct 6797 TTCATCTCACACATCCTTGCATTCTT-CGCCGCTTCTGATGGCATCGTCAACGAGAACCT 6855
Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004
| | || || | || ||||| | || ||||| |||| || ||||| |||||
Sbjct 6856 CGTTGAGCGATTCAGCGCCGAAGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCA 6915
Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064
|||| || || ||||| ||||| || || |||||||||||||||||||| ||| ||||
Sbjct 6916 GATCATGATGGAGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTACATCAA 6975
Query 1456065 GGA 1456067
|||
Sbjct 6976 GGA 6978
Score = 93.3 bits (102), Expect = 6e-13
Identities = 117/157 (75%), Gaps = 9/157 (6%)
Strand=Plus/Plus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| |||||||||||||| ||| |||||||| ||||| || || || |||||||
Sbjct 7102 AAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAG----TCAAC-CTTTGCCA 7156
Query 1456180 AGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
||| || ||| || || | ||||||||| ||||| ||| || ||| | |||
Sbjct 7157 CGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCA 7216
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||| |||||||||||||| ||||| ||||| |||||
Sbjct 7217 TCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCT 7253
>seq628
Length=19608
Score = 145 bits (160), Expect = 1e-28
Identities = 187/258 (72%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
|| ||||| || || |||||||| |||| | ||| ||||| ||||| ||| | ||
Sbjct 4610 CCGACGCTTTTCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGAT 4551
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| ||||| ||||| |||||| || || | ||||||
Sbjct 4550 ATGAAGGACGACAGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCC 4491
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| ||| ||||| |||||| | || || | || ||| | ||| |||| |
Sbjct 4490 AAGATGGCTGGCGGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGGCTCCTATATC 4431
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || ||||||||| || |||||| |||| |||||||| || || || ||| ||||
Sbjct 4430 GCCGGTACCAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACA 4371
Query 260165 GCGCGCTACGTCGACCAG 260182
|| |||||||||||||||
Sbjct 4370 GCTCGCTACGTCGACCAG 4353
>seq375
Length=25710
Score = 98.7 bits (108), Expect = 1e-14
Identities = 80/97 (82%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827
||||| |||||||| |||||||||||||||||| | ||||||||| |||| || | ||
Sbjct 13399 GGCGCAGTCGGTGCCCGCACCACCGAGAGCCAGCTTCACCGCGAGCTGGCCTCTGGCCTA 13340
Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864
|| | ||| | |||||||| ||| ||||||||||||
Sbjct 13339 TCGTTCCCCGTCGGCTTCAAGAACGGCACCGACGGCA 13303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177121183550948
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |