Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F001675595.1_202016-06-23] 7,154 sequences; 41,344,138 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq628 141 1e-28 >seq628 Length=19608 Score = 141 bits (156), Expect = 1e-28 Identities = 562/875 (64%), Gaps = 16/875 (2%) Strand=Plus/Plus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 || || || || || | ||| || ||||| ||| ||| |||||||| || || ||| Sbjct 3949 ATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAAC 4008 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471 || ||||||| ||| |||||| || | || || | ||||| | || || || Sbjct 4009 GGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAGTACCAAAGTTTCTGGGCCTTGATC 4068 Query 69472 ACGGTCTTGTAACGCTTCTCT---TTTTCATA-TTGTG-TATATAGCCGTTCGAATTCAT 69526 |||||| || ||| | | ||||| || | || | |||| ||||| || | Sbjct 4069 ---GTCTTGCGACCCTTACCGGCCTGCTCATACTTCTCATACAGAGCC--TCGAACTCTT 4123 Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586 | || | || | | ||||| || || || || |||||||| | ||| | | | Sbjct 4124 CACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGT 4183 Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646 | || ||| || ||||| || ||||| || ||||||||||| | || || || | || Sbjct 4184 TTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGG 4243 Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706 | | | || || ||||| || || | || ||||| ||||| | | ||| | | Sbjct 4244 CACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGT 4303 Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766 |||| || || || || || || | | | || || || || || || ||||| || | || Sbjct 4304 GCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGT 4363 Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826 | | || ||||| || | || | |||||| |||| ||| || || || | || || | Sbjct 4364 AGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGG 4423 Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTG 69886 | || | ||||| || | || || || | | ||||| || || || | Sbjct 4424 TACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAG 4483 Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946 |||| || ||||| | |||||| || | ||||| || || ||||| ||||| || | Sbjct 4484 CCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGT 4543 Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006 | |||| | || || || || |||| ||| || || || || || || | Sbjct 4544 CCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAA 4603 Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066 || || || ||||| ||||| |||| ||| | || ||||| ||||| || || Sbjct 4604 GCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTC 4663 Query 70067 ATTCTAT-ATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125 || || | ||| | || |||| || |||||||| | ||| ||||| || | Sbjct 4664 GCTCAATGTTGTCACCCCAG-ATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTC 4722 Query 70126 TCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAA 70185 || || | || ||| | ||||| ||||| || | || ||||| || || || ||| Sbjct 4723 TCGACAATCTTGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAA 4782 Query 70186 TAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATA 70218 || | ||| ||||| || | ||||| | |||| Sbjct 4783 TATTGGTAGTTGAAA--TCACGGTCGTAGACAATA 4815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686847373180560